Basic Information:

  VIRBase ID:  

VHID00587118

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Ttc14:  NM_001290500     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Ttc14
miRBase Accession/Entrez ID	MIMAT0005533	67120
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2700016E08Rik//4930434D01Rik//4931403I22Rik//4933402I15Rik//AI662468//AU014779//AW561908//cI-4//cI-44//mKIAA1980

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ttc14	chr3:33799930-33799931(+) m6A 5'UTR       25412662 chr3:33799935-33799936(+) m6A 5'UTR       25412662 chr3:33799944-33799945(+) m6A 5'UTR       25412662 chr3:33799983-33799984(+) m6A 5'UTR       25412662 chr3:33800009-33800010(+) m6A 5'UTR       25412662 chr3:33800038-33800039(+) m6A 5'UTR       25412662 chr3:33800169-33800170(+) m6A 5'UTR       25412662//25569111 chr3:33800282-33800283(+) m6A 5'UTR//CDS//exon       25412662//25569111 chr3:33800349-33800350(+) m6A 5'UTR//CDS//exon       25412662//25569111 chr3:33800357-33800358(+) m6A 5'UTR//CDS//exon       25412662//25569111 chr3:33800473-33800474(+) m6A 5'UTR//exon//intron       25412662//25569111 chr3:33800482-33800483(+) m6A 5'UTR//exon//intron       25412662//25569111 chr3:33800597-33800598(+) m6A CDS//exon//intron       25569111 chr3:33800609-33800610(+) m6A CDS//exon//intron       25569111 chr3:33804468-33804469(+) Y CDS//exon       26075521 chr3:33804500-33804501(+) m6A CDS       24981863//22608085 chr3:33804504-33804505(+) m6A CDS       24981863 chr3:33804662-33804663(+) m6A CDS//intron       24981863//22608085 chr3:33804739-33804740(+) m6A CDS//intron       22608085 chr3:33806882-33806883(+) m6A CDS       - chr3:33807861-33807862(+) m6A 3'UTR//CDS       24981863 chr3:33807889-33807890(+) m6A 3'UTR//CDS       24981863 chr3:33807904-33807905(+) m6A 3'UTR//CDS       24981863 chr3:33807952-33807953(+) m6A 3'UTR//intron       24981863 chr3:33807980-33807981(+) m6A 3'UTR//intron       24981863 chr3:33808553-33808554(+) m6A 3'UTR//intron       24981863//22608085 chr3:33808606-33808607(+) m6A 3'UTR//intron       24981863//22608085 chr3:33808618-33808619(+) m6A 3'UTR//intron       24981863//22608085 chr3:33809085-33809086(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809106-33809107(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809132-33809133(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809182-33809183(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809221-33809222(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809299-33809300(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809324-33809325(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809366-33809367(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809395-33809396(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809425-33809426(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809491-33809492(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:33809572-33809573(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr3:33810998-33810999(+) m6A 3'UTR       24981863 chr3:33811008-33811009(+) m6A 3'UTR       24981863 chr3:33811191-33811192(+) Y 3'UTR//exon       26075521 chr3:33813241-33813242(+) Y 3'UTR//exon       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ttc14	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Ttc14

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar