Detail Information

Basic Information:


  VIRBase ID:  

VHID00587060

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:           Tmem186:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-1 Tmem186
miRBase
Accession/Entrez ID
MIMAT0005533 66690
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 2810440M13Rik//4432406C05Rik//AI648175//AW210586

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Tmem186
chr16:8634139-8634140(-) m6A 3'UTR       25456834
chr16:8634186-8634187(-) m6A 3'UTR       24981863//25456834
chr16:8634268-8634269(-) m6A 3'UTR       25683224//24981863//25456834//25569111
chr16:8634279-8634280(-) m6A 3'UTR       25683224//24981863//25456834//25569111
chr16:8634300-8634301(-) m6A 3'UTR       25683224//24981863//25456834//25569111
chr16:8634354-8634355(-) m6A 3'UTR       25683224//24981863//25456834//25569111
chr16:8634418-8634419(-) m6A 3'UTR       25683224//24981863//25569111
chr16:8634813-8634814(-) m6A 3'UTR       24981863
chr16:8634844-8634845(-) m6A 3'UTR       24981863
chr16:8634877-8634878(-) m6A 3'UTR       24981863
chr16:8634948-8634949(-) m6A 3'UTR       24981863
chr16:8635318-8635319(-) m6A 3'UTR       25456834
chr16:8635382-8635383(-) m6A 3'UTR       24981863//25456834
chr16:8635462-8635463(-) m6A 3'UTR       25683224//25456834//24981863//25569111
chr16:8635469-8635470(-) m6A 3'UTR       25683224//25456834//24981863//25569111
chr16:8635551-8635552(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr16:8635583-8635584(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr16:8635601-8635602(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr16:8635666-8635667(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr16:8635684-8635685(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr16:8635695-8635696(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr16:8635709-8635710(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr16:8635754-8635755(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr16:8635773-8635774(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr16:8635802-8635803(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr16:8635839-8635840(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:8635916-8635917(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:8635937-8635938(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:8636017-8636018(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:8636160-8636161(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:8636232-8636233(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:8636238-8636239(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:8636326-8636327(-) m6A CDS       25683224//25456834//25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-1
Interactor2: Tmem186

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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