Basic Information:

  VIRBase ID:  

VHID00587017

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Ccdc28b:  NM_025455     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Ccdc28b
miRBase Accession/Entrez ID	MIMAT0005533	66264
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1110002E08Rik//1810010N17Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ccdc28b	chr4:129619288-129619289(-) m6A 3'UTR//exon       22608085 chr4:129619354-129619355(-) m6A 3'UTR//exon       22608085 chr4:129619379-129619380(-) m6A 3'UTR//exon       22608085 chr4:129619407-129619408(-) m6A 3'UTR//CDS//exon       22608085 chr4:129620588-129620589(-) m6A 3'UTR//exon//intron       25683224//25412662//24981863 chr4:129620647-129620648(-) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085 chr4:129620698-129620699(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr4:129620720-129620721(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25456834 chr4:129620814-129620815(-) m6A CDS//exon       25683224//25412662//24981863 chr4:129620892-129620893(-) m6A exon//intron       25683224//25412662//22608085 chr4:129621024-129621025(-) m6A CDS//exon       25683224//25412662//22608085 chr4:129621032-129621033(-) m6A CDS//exon       25683224//25412662//22608085 chr4:129622325-129622326(-) m6A exon//intron       25683224//24981863 chr4:129622331-129622332(-) m6A exon//intron       25683224//24981863 chr4:129622349-129622350(-) m6A exon//intron       25683224//24981863 chr4:129622377-129622378(-) m6A exon//intron       25683224 chr4:129622643-129622644(-) m6A CDS//exon       25683224//24981863 chr4:129622755-129622756(-) m6A CDS//exon       25683224//24981863//25569111 chr4:129623320-129623321(-) m6A exon//intron       25683224//25456834//25412662//24981863//25569111 chr4:129623339-129623340(-) m6A exon//intron       25683224//25456834//25412662//24981863//25569111 chr4:129623363-129623364(-) m6A exon//intron       25683224//25456834//25412662//24981863//25569111 chr4:129623820-129623821(-) m6A 5'UTR//exon       24981863//25569111 chr4:129623827-129623828(-) m6A 5'UTR//exon       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Ccdc28b

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar