Basic Information:

  VIRBase ID:  

VHID00586882

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Mtor:  NM_020009     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Mtor
miRBase Accession/Entrez ID	MIMAT0005533	56717
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610315D21Rik//AI327068//fl//flat//Fr//FRAP//Frap1//FRAP2//RA//RAF//RAFT1//RAPT1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mtor	chr4:148452353-148452354(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr4:148452375-148452376(+) m6A CDS//exon       25683224//24981863//25569111 chr4:148454645-148454646(+) m6A CDS//exon       25412662//22608085 chr4:148454718-148454719(+) m6A CDS//exon       25412662//22608085 chr4:148454966-148454967(+) m6A 3'UTR//exon//intron       25412662 chr4:148456020-148456021(+) m6A CDS       25683224//25412662//22608085 chr4:148458690-148458691(+) m6A CDS       25683224 chr4:148458707-148458708(+) m6A CDS       25683224 chr4:148458781-148458782(+) m6A CDS       24981863 chr4:148458876-148458877(+) m6A CDS       25683224//22608085 chr4:148459020-148459021(+) m6A CDS       25683224//22608085 chr4:148462804-148462805(+) m6A CDS       25683224//22608085 chr4:148462813-148462814(+) m6A CDS       25683224//22608085 chr4:148464522-148464523(+) m6A CDS       25683224//25412662 chr4:148464994-148464995(+) m6A CDS       25683224//25412662 chr4:148469001-148469002(+) m6A CDS       25683224 chr4:148469015-148469016(+) m6A CDS       25683224 chr4:148469027-148469028(+) m6A CDS       25683224 chr4:148469067-148469068(+) m6A CDS       25683224//22608085 chr4:148469421-148469422(+) m6A CDS       25683224//22608085 chr4:148469433-148469434(+) m6A CDS       25683224//22608085 chr4:148470233-148470234(+) m6A CDS       25683224//22608085 chr4:148470241-148470242(+) m6A CDS       25683224//22608085 chr4:148470336-148470337(+) m6A CDS       25683224//22608085 chr4:148470626-148470627(+) m6A CDS       25683224//22608085 chr4:148514898-148514899(+) m6A CDS       25683224//22608085 chr4:148514904-148514905(+) m6A CDS       25683224//22608085 chr4:148514913-148514914(+) m6A CDS       25683224//22608085 chr4:148521325-148521326(+) m6A CDS       25683224 chr4:148521343-148521344(+) m6A CDS       25683224 chr4:148536535-148536536(+) m6A CDS       25412662//22608085 chr4:148536560-148536561(+) m6A CDS       25412662//22608085 chr4:148536568-148536569(+) m6A CDS       25412662//22608085 chr4:148536718-148536719(+) m6A CDS       25412662//22608085 chr4:148538541-148538542(+) m6A CDS       25683224//22608085 chr4:148538551-148538552(+) m6A CDS       25683224//22608085 chr4:148549390-148549391(+) m6A CDS       25683224 chr4:148549429-148549430(+) m6A CDS       25683224 chr4:148549834-148549835(+) m6A CDS       25683224 chr4:148550114-148550115(+) m6A CDS       25683224//22608085 chr4:148550149-148550150(+) m6A CDS       25683224//22608085 chr4:148550157-148550158(+) m6A CDS       25683224//22608085 chr4:148550220-148550221(+) m6A CDS       25683224//22608085 chr4:148550987-148550988(+) m6A CDS       25683224//22608085 chr4:148550993-148550994(+) m6A CDS       25683224//22608085 chr4:148552730-148552731(+) m6A CDS       25683224//22608085 chr4:148552739-148552740(+) m6A CDS       25683224//22608085 chr4:148552761-148552762(+) m6A CDS       25683224//22608085 chr4:148553049-148553050(+) m6A CDS       25683224//22608085 chr4:148553063-148553064(+) m6A CDS       25683224//22608085 chr4:148556347-148556348(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:148556874-148556875(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:148556924-148556925(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:148556930-148556931(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:148556937-148556938(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:148556949-148556950(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:148556983-148556984(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:148557037-148557038(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//26404942//22608085//22575960 chr4:148557049-148557050(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//26404942//22608085//22575960 chr4:148557075-148557076(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:148557083-148557084(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:148557125-148557126(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:148557176-148557177(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:148557187-148557188(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:148557244-148557245(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//22608085 chr4:148557367-148557368(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr4:148557376-148557377(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr4:148557394-148557395(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr4:148557512-148557513(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr4:148557519-148557520(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr4:148557542-148557543(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr4:148557623-148557624(+) m6A 3'UTR       24981863//25456834//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Mtor	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Mtor

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar