Basic Information:

  VIRBase ID:  

VHID00586831

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Pitpnb:  NM_001301666     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Pitpnb
miRBase Accession/Entrez ID	MIMAT0005533	56305
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	PI-TP-beta

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Pitpnb	chr5:111809699(+) A-I      intronic chr5:111809694(+) A-I      intronic chr5:111810234(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Pitpnb	chr5:111380674(+) A-I intron -    22524474 chr5:111380679(+) A-I intron -    22524474 chr5:111381214(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pitpnb	chr5:111380288-111380289(+) m6A CDS//exon       22608085 chr5:111383009-111383010(+) m6A CDS//exon       22608085 chr5:111383066-111383067(+) m6A CDS//exon       25683224//22608085 chr5:111383089-111383090(+) m6A CDS//exon       25683224//22608085 chr5:111383100-111383101(+) m6A CDS//exon       25683224//22608085 chr5:111383107-111383108(+) m6A CDS//exon       25683224 chr5:111383163-111383164(+) m6A exon//intron       25683224 chr5:111383172-111383173(+) m6A exon//intron       25683224 chr5:111383228-111383229(+) m6A exon//intron       25683224 chr5:111386947-111386948(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr5:111386985-111386986(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr5:111386993-111386994(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22575960 chr5:111387050-111387051(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22575960 chr5:111387189-111387190(+) m6A 3'UTR       24981863 chr5:111387661-111387662(+) m6A 3'UTR       25412662 chr5:111387709-111387710(+) m6A 3'UTR       25412662 chr5:111388125-111388126(+) Y 3'UTR//exon       26075521 chr5:111388165-111388166(+) m6A 3'UTR       24981863//25569111 chr5:111388175-111388176(+) m6A 3'UTR       24981863//25569111 chr5:111388216-111388217(+) m6A 3'UTR       24981863//25569111 chr5:111388245-111388246(+) m6A 3'UTR       24981863//25569111 chr5:111388313-111388314(+) m6A 3'UTR       24981863//25569111 chr5:111388321-111388322(+) m6A 3'UTR       24981863//25569111 chr5:111388333-111388334(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Pitpnb

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar