Basic Information:

  VIRBase ID:  

VHID00586776

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Atf7ip:  NM_001388197     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Atf7ip
miRBase Accession/Entrez ID	MIMAT0005533	54343
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610204M12Rik//5830415B17Rik//A//AM//Mcaf//Mcaf1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Atf7ip	chr6:136488141(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Atf7ip	chr6:136518927-136518928(+) m6A 5'UTR//exon//intron       25683224//24981863//25569111//22608085 chr6:136519034-136519035(+) m6A exon//intron       25683224//25569111 chr6:136559787-136559788(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr6:136559818-136559819(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr6:136559924-136559925(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr6:136559951-136559952(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr6:136560040-136560041(+) m6A CDS//intron       25683224//24981863//25456834//25569111 chr6:136560071-136560072(+) m6A CDS//intron       25683224//24981863//25456834//25569111 chr6:136560147-136560148(+) m6A CDS//intron       25683224//24981863//25456834//25569111 chr6:136560257-136560258(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr6:136560552-136560553(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr6:136560582-136560583(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560662-136560663(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560690-136560691(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560732-136560733(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560753-136560754(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560799-136560800(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560855-136560856(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560863-136560864(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560881-136560882(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560908-136560909(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560933-136560934(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560943-136560944(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136560983-136560984(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561098-136561099(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561121-136561122(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561136-136561137(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561157-136561158(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561166-136561167(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561177-136561178(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561206-136561207(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561227-136561228(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561267-136561268(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136561320-136561321(+) m6A CDS//intron       25683224//25456834//24981863//25412662//25569111 chr6:136565052-136565053(+) m6A 5'UTR//CDS       25683224 chr6:136565058-136565059(+) m6A CDS       25683224 chr6:136566725-136566726(+) m6A CDS       24981863//22608085 chr6:136571531-136571532(+) m6A CDS       24981863 chr6:136575254-136575255(+) m6A CDS       24981863 chr6:136577586-136577587(+) m6A exon//intron       24981863 chr6:136577593-136577594(+) m6A exon//intron       24981863 chr6:136581874-136581875(+) m6A exon//intron       25683224 chr6:136587096-136587097(+) m6A CDS       25569111 chr6:136587103-136587104(+) m6A CDS       25569111 chr6:136587196-136587197(+) m6A CDS       24981863//25569111 chr6:136587295-136587296(+) m6A CDS       25456834//24981863//25569111//22608085 chr6:136587404-136587405(+) m6A CDS       25456834//24981863//25569111//22608085 chr6:136587414-136587415(+) m6A CDS       25456834//24981863//25569111//22608085 chr6:136587419-136587420(+) m6A CDS       25456834//24981863//25569111//22608085 chr6:136587458-136587459(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr6:136587487-136587488(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr6:136587544-136587545(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr6:136587573-136587574(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr6:136587654-136587655(+) m6A CDS       25456834//24981863//25569111 chr6:136593084-136593085(+) m6A CDS       25456834//24981863//25569111 chr6:136593089-136593090(+) m6A CDS       25456834//24981863//25569111 chr6:136593098-136593099(+) m6A CDS       25456834//24981863//25569111 chr6:136596503-136596504(+) m6A CDS//exon       24981863 chr6:136605423-136605424(+) m6A CDS//exon       25569111 chr6:136605430-136605431(+) m6A CDS//exon       25569111 chr6:136606568-136606569(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr6:136606639-136606640(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:136606819-136606820(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:136606885-136606886(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr6:136606893-136606894(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr6:136607002-136607003(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr6:136607079-136607080(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr6:136607088-136607089(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr6:136607144-136607145(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr6:136607356-136607357(+) m6A 3'UTR//exon       24981863//25456834 chr6:136607581-136607582(+) m6A 3'UTR//exon       25683224 chr6:136607650-136607651(+) m6A 3'UTR//exon       25683224 chr6:136608543-136608544(+) m6A 3'UTR       - chr6:136608621-136608622(+) m6A 3'UTR       24981863 chr6:136608667-136608668(+) m6A 3'UTR       24981863 chr6:136609143-136609144(+) m6A 3'UTR       25412662//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Atf7ip

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar