Basic Information:

  VIRBase ID:  

VHID00586469

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Ubp1:  NR_164181     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Ubp1
miRBase Accession/Entrez ID	MIMAT0005533	22221
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Cp2b//LBP//LBP-//LBP-1a//LBP-1b//NF2d//NF2d9

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ubp1	chr9:113930973-113930974(+) m6A 5'UTR       25412662//25569111 chr9:113931611-113931612(+) m6A 5'UTR       25412662 chr9:113944977-113944978(+) m6A CDS       22608085 chr9:113958841-113958842(+) m6A CDS       24981863 chr9:113958848-113958849(+) m6A CDS       24981863 chr9:113958882-113958883(+) m6A CDS       24981863 chr9:113959410-113959411(+) m6A CDS//intron       25412662//24981863 chr9:113959438-113959439(+) m6A CDS//intron       25412662//24981863 chr9:113959451-113959452(+) m6A CDS//intron       25412662//24981863 chr9:113964588-113964589(+) m6A CDS       24981863 chr9:113964651-113964652(+) m6A CDS       24981863 chr9:113973528-113973529(+) m6A CDS       24981863//25569111 chr9:113973542-113973543(+) m6A CDS       24981863//25569111 chr9:113975395-113975396(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:113975400-113975401(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:113975445-113975446(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:113975501-113975502(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:113975696-113975697(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:113975701-113975702(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:113975760-113975761(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:113975812-113975813(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr9:113975923-113975924(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr9:113975944-113975945(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr9:113975982-113975983(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr9:113976213-113976214(+) m6A 3'UTR//intron       25569111//22608085 chr9:113976235-113976236(+) m6A 3'UTR//intron       24981863//25569111//22608085 chr9:113976243-113976244(+) m6A 3'UTR//intron       24981863//25569111//22608085 chr9:113976259-113976260(+) m6A 3'UTR//intron       24981863//25569111//22608085 chr9:113976757-113976758(+) m6A 3'UTR       24981863 chr9:113977111-113977112(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Ubp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar