Basic Information:

  VIRBase ID:  

VHID00586116

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Pdcd4:  NM_001168492     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Pdcd4
miRBase Accession/Entrez ID	MIMAT0005533	18569
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	D19Ucl//D19Ucla1//MA-//Ma3//T//Tis

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pdcd4	chr19:53903363-53903364(+) m6A 5'UTR//intron       25456834//25412662//24981863//25569111 chr19:53903368-53903369(+) m6A 5'UTR//intron       25456834//25412662//24981863//25569111 chr19:53903374-53903375(+) m6A 5'UTR//intron       25456834//25412662//24981863//25569111 chr19:53903452-53903453(+) m6A 5'UTR//intron       25412662//24981863//25456834//25569111 chr19:53903459-53903460(+) m6A 5'UTR//intron       25412662//24981863//25456834//25569111 chr19:53907461-53907462(+) m6A 5'UTR       24981863//25456834//25569111 chr19:53907533-53907534(+) m6A CDS       24981863//25569111 chr19:53907546-53907547(+) m6A CDS       24981863//25569111 chr19:53909276-53909277(+) m6A CDS       25683224//25412662//24981863//25569111 chr19:53909291-53909292(+) m6A CDS       25683224//25412662//24981863//25569111 chr19:53910964-53910965(+) m6A CDS       24981863 chr19:53911005-53911006(+) m6A CDS       24981863 chr19:53912815-53912816(+) m6A CDS       24981863 chr19:53912829-53912830(+) m6A CDS       24981863 chr19:53912853-53912854(+) m6A CDS       24981863//22608085 chr19:53919816-53919817(+) m6A CDS       25412662//22608085//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pdcd4	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Pdcd4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar