Basic Information:

  VIRBase ID:  

VHID00585696

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Fga:  NM_001111048     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Fga
miRBase Accession/Entrez ID	MIMAT0005533	14161
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Fi//Fib

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fga	chr3:83026209-83026210(+) m6A 5'UTR       26404942//22575960 chr3:83028595-83028596(+) m6A CDS       26404942 chr3:83028615-83028616(+) m6A CDS       26404942 chr3:83028621-83028622(+) m6A CDS       26404942 chr3:83029148-83029149(+) m6A CDS       26404942 chr3:83029169-83029170(+) m6A CDS       26404942 chr3:83029193-83029194(+) m6A CDS       26404942 chr3:83029247-83029248(+) m6A CDS       26404942 chr3:83030217-83030218(+) m6A CDS       26404942 chr3:83030908-83030909(+) m6A CDS       22575960 chr3:83030927-83030928(+) m6A CDS       22575960 chr3:83030971-83030972(+) m6A CDS       22575960 chr3:83031110-83031111(+) m6A CDS       25412662//26404942//22575960 chr3:83031151-83031152(+) m6A CDS       25412662//26404942//22575960 chr3:83031175-83031176(+) m6A CDS       25412662//26404942//22575960 chr3:83031191-83031192(+) m6A CDS       25412662//26404942//22575960 chr3:83031211-83031212(+) m6A CDS       25412662//26404942//22575960 chr3:83031220-83031221(+) m6A CDS       25412662//26404942//22575960 chr3:83031227-83031228(+) m6A CDS       25412662//26404942//22575960 chr3:83031259-83031260(+) m6A CDS       25412662//26404942//22575960 chr3:83031289-83031290(+) m6A CDS       25412662//26404942//22575960 chr3:83031297-83031298(+) m6A CDS       25412662//26404942//22575960 chr3:83031322-83031323(+) m6A CDS       25412662//26404942//22575960 chr3:83031344-83031345(+) m6A CDS       25412662//26404942//22575960 chr3:83031355-83031356(+) m6A CDS       25412662//26404942//22575960 chr3:83031364-83031365(+) m6A CDS       25412662//26404942//22575960 chr3:83031412-83031413(+) m6A CDS       26404942//22575960 chr3:83031549-83031550(+) m6A CDS       26404942//22575960 chr3:83031561-83031562(+) m6A CDS       26404942//22575960 chr3:83031628-83031629(+) m6A CDS       26404942//22575960 chr3:83031652-83031653(+) m6A CDS       26404942//22575960 chr3:83031686-83031687(+) m6A CDS       26404942//22575960 chr3:83031774-83031775(+) m6A CDS       26404942//22575960 chr3:83031802-83031803(+) m6A CDS       26404942//22575960 chr3:83031811-83031812(+) m6A CDS       26404942//22575960 chr3:83031852-83031853(+) m6A CDS       26404942 chr3:83031869-83031870(+) m6A CDS       26404942 chr3:83031882-83031883(+) m6A CDS       26404942 chr3:83031933-83031934(+) m6A CDS       26404942 chr3:83032807-83032808(+) m6A CDS       22575960 chr3:83032870-83032871(+) m6A CDS       26404942//22575960 chr3:83032880-83032881(+) m6A CDS       26404942//22575960 chr3:83032997-83032998(+) m6A CDS       26404942//22575960 chr3:83033131-83033132(+) m6A CDS       26404942//22575960 chr3:83033201-83033202(+) m6A CDS       26404942//22575960 chr3:83033300-83033301(+) m6A CDS       26404942//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Fga	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Fga

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar