Basic Information:

  VIRBase ID:  

VHID00585483

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Aspm:  NM_009791     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Aspm
miRBase Accession/Entrez ID	MIMAT0005533	12316
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A//Calm//Calmbp1//D330028K02Rik//MCPH//MCPH5//Sh//Sha1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Aspm	chr1:139454783-139454784(+) m6A 5'UTR//exon       24981863//25569111 chr1:139454894-139454895(+) m6A 5'UTR//exon       25412662//25569111 chr1:139455004-139455005(+) m6A CDS//exon       25412662 chr1:139455125-139455126(+) m6A CDS//exon       25683224//25412662 chr1:139455388-139455389(+) m6A exon//intron       22608085 chr1:139455396-139455397(+) m6A exon//intron       22608085 chr1:139455413-139455414(+) m6A exon//intron       22608085 chr1:139455478-139455479(+) m6A exon//intron       22608085 chr1:139455516-139455517(+) m6A exon//intron       22608085 chr1:139457080-139457081(+) m6A CDS//exon       25456834//24981863//25569111 chr1:139457093-139457094(+) m6A CDS//exon       25456834//24981863//25569111 chr1:139457103-139457104(+) m6A CDS//exon       25456834//24981863//25569111 chr1:139457142-139457143(+) m6A CDS//exon       25456834//24981863//25569111 chr1:139457211-139457212(+) m6A CDS//exon       25456834//24981863//25569111 chr1:139457261-139457262(+) m6A CDS//exon       25456834//24981863//25569111 chr1:139457363-139457364(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr1:139457396-139457397(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr1:139457446-139457447(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr1:139457463-139457464(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr1:139457492-139457493(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr1:139457529-139457530(+) m6A CDS//exon       25456834//24981863//25569111 chr1:139457583-139457584(+) m6A CDS//exon       24981863 chr1:139457630-139457631(+) m6A CDS//exon       24981863 chr1:139457651-139457652(+) m6A CDS//exon       25683224//24981863//25569111 chr1:139457692-139457693(+) m6A CDS//exon       25683224//24981863//25569111 chr1:139457709-139457710(+) m6A CDS//exon       25683224//24981863//25569111 chr1:139457767-139457768(+) m6A CDS//exon       25683224//24981863//25569111 chr1:139457864-139457865(+) m6A CDS//exon       25683224//24981863//25569111 chr1:139457887-139457888(+) m6A CDS//exon       25683224//24981863//25569111 chr1:139457892-139457893(+) m6A CDS//exon       25683224//24981863//25569111 chr1:139457983-139457984(+) m6A CDS//exon       24981863//25569111 chr1:139458034-139458035(+) m6A CDS//exon       24981863//25569111 chr1:139458260-139458261(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr1:139458306-139458307(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr1:139458371-139458372(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr1:139461442-139461443(+) m6A CDS//exon       25683224 chr1:139461457-139461458(+) m6A CDS//exon       25683224 chr1:139467931-139467932(+) m6A CDS//exon       25683224 chr1:139467948-139467949(+) m6A CDS//exon       25683224 chr1:139468027-139468028(+) m6A CDS//exon       25683224 chr1:139471697-139471698(+) m6A CDS//exon       25683224//24981863 chr1:139471715-139471716(+) m6A CDS//exon       25683224//24981863 chr1:139477659-139477660(+) m6A CDS//intron       25569111 chr1:139477833-139477834(+) m6A CDS//intron       24981863//25569111 chr1:139477998-139477999(+) m6A CDS//intron       24981863//25569111 chr1:139478021-139478022(+) m6A CDS//intron       24981863//25569111 chr1:139478119-139478120(+) m6A CDS//intron       24981863//25456834//25569111 chr1:139478173-139478174(+) m6A CDS//intron       24981863//25456834//25569111 chr1:139478299-139478300(+) m6A CDS//intron       24981863//25569111 chr1:139478309-139478310(+) m6A CDS//intron       24981863//25569111 chr1:139478355-139478356(+) m6A CDS//intron       24981863//25569111 chr1:139478427-139478428(+) m6A CDS//intron       24981863//25569111 chr1:139478481-139478482(+) m6A CDS//intron       24981863//25569111 chr1:139478575-139478576(+) m6A CDS//intron       24981863//25569111 chr1:139478669-139478670(+) m6A CDS//intron       24981863//25569111 chr1:139478815-139478816(+) m6A CDS//intron       24981863//25569111 chr1:139478899-139478900(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr1:139479033-139479034(+) m6A CDS//intron       25412662//25569111 chr1:139479174-139479175(+) m6A CDS//intron       25412662//25569111 chr1:139479262-139479263(+) m6A CDS//intron       25569111 chr1:139479315-139479316(+) m6A CDS//intron       25569111 chr1:139479337-139479338(+) m6A CDS//intron       24981863//25569111 chr1:139479454-139479455(+) m6A CDS//intron       24981863//25569111 chr1:139479481-139479482(+) m6A CDS//intron       24981863//25569111 chr1:139479700-139479701(+) m6A CDS//intron       24981863//25569111 chr1:139479775-139479776(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr1:139479793-139479794(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr1:139479832-139479833(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139479885-139479886(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139479898-139479899(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139479993-139479994(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480035-139480036(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480042-139480043(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480050-139480051(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480102-139480103(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480141-139480142(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480161-139480162(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480176-139480177(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr1:139480392-139480393(+) m6A CDS//intron       24981863//25569111 chr1:139480450-139480451(+) m6A CDS//intron       24981863//25569111 chr1:139480468-139480469(+) m6A CDS//intron       24981863//25569111 chr1:139480662-139480663(+) m6A CDS//intron       25456834//24981863//25569111 chr1:139480738-139480739(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr1:139480798-139480799(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr1:139480807-139480808(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr1:139480830-139480831(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr1:139480845-139480846(+) m6A CDS//intron       25683224//25456834//24981863//25569111 chr1:139480945-139480946(+) m6A CDS//intron       25456834//24981863//25569111 chr1:139480999-139481000(+) m6A CDS//intron       24981863//25456834//25569111 chr1:139481033-139481034(+) m6A CDS//intron       24981863//25456834//25569111 chr1:139481043-139481044(+) m6A CDS//intron       24981863//25456834//25569111 chr1:139489686-139489687(+) m6A CDS       25412662 chr1:139489745-139489746(+) m6A CDS       25412662 chr1:139489800-139489801(+) m6A CDS       25412662//24981863 chr1:139490066-139490067(+) m6A CDS       25683224//24981863 chr1:139490083-139490084(+) m6A CDS       25683224 chr1:139490118-139490119(+) m6A CDS       25683224 chr1:139490311-139490312(+) m6A CDS       25683224

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Aspm	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Aspm

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar