Detail Information

Basic Information:


  VIRBase ID:  

VHID00585469

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:           C1qc:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-1 C1qc
miRBase
Accession/Entrez ID
MIMAT0005533 12262
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - Adib//AI385742//C1qg//Ciqc

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase C1qc
chr4:136889854-136889855(-) m6A 3'UTR       24981863
chr4:136889902-136889903(-) m6A 3'UTR       24981863//22575960
chr4:136889974-136889975(-) m6A 3'UTR       24981863//22575960
chr4:136890232-136890233(-) m6A CDS       24981863
chr4:136890398-136890399(-) m6A CDS       24981863
chr4:136890435-136890436(-) m6A CDS       24981863//22575960
chr4:136890487-136890488(-) m6A CDS       24981863//22575960
chr4:136890506-136890507(-) m6A CDS       24981863//22575960
chr4:136890570-136890571(-) m6A CDS       24981863//22575960
chr4:136890578-136890579(-) m6A CDS       24981863//22575960
chr4:136891688-136891689(-) m6A exon//intron       24981863
chr4:136891701-136891702(-) m6A exon//intron       24981863
chr4:136891710-136891711(-) m6A exon//intron       24981863
chr4:136891720-136891721(-) m6A exon//intron       24981863
chr4:136892281-136892282(-) m6A exon//intron       24981863
chr4:136892295-136892296(-) m6A exon//intron       24981863
chr4:136892403-136892404(-) m6A CDS//exon       24981863
chr4:136892526-136892527(-) m6A CDS//exon       24981863//22575960
chr4:136892550-136892551(-) m6A CDS//exon       24981863//22575960
chr4:136892887-136892888(-) m6A 5'UTR       24981863//22575960
chr4:136892910-136892911(-) m6A 5'UTR       24981863//22575960

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-1
Interactor2: C1qc

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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