Detail Information

Basic Information:


  VIRBase ID:  

VHID00585087

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:           KLHL30:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B22-3p KLHL30
miRBase
Accession/Entrez ID
MIMAT0031773 377007
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KLHL30
chr2:239055152(+) A-I      intronic
chr2:239055553(+) A-I      intronic
chr2:239055500(+) A-I      intronic
chr2:239055231(+) A-I      intronic
chr2:239055160(+) A-I      intronic
chr2:239055103(+) A-I      intronic
chr2:239055117(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KLHL30
chr2:239049649-239049650(+) m6A CDS       -
chr2:239049660-239049661(+) m6A CDS       -
chr2:239049876-239049877(+) m6A CDS       -
chr2:239059590-239059591(+) m6A CDS       -
chr2:239059598-239059599(+) m6A CDS       -
chr2:239059673-239059674(+) m6A CDS       -
chr2:239059864-239059865(+) m6A 3'UTR       -
chr2:239059897-239059898(+) m6A 3'UTR       24284625
chr2:239059951-239059952(+) m6A 3'UTR       24284625
chr2:239059984-239059985(+) m6A 3'UTR       -
chr2:239060053-239060054(+) m6A 3'UTR       -
chr2:239060097-239060098(+) m6A 3'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KLHL30
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B22-3p
Interactor2: KLHL30

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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