Basic Information:

  VIRBase ID:  

VHID00584149

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          TMEM129:  NM_001127266     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	TMEM129
miRBase Accession/Entrez ID	MIMAT0031773	92305
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	D4S2561E

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM129	chr4:1721088(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM129	chr4:1717732-1717733(-) m6A 3'UTR       24981863//27773535//22608085 chr4:1717813-1717814(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr4:1717911-1717912(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr4:1718161-1718162(-) m6A 3'UTR       24284625//24209618 chr4:1718187-1718188(-) m6A 3'UTR       24284625//24209618 chr4:1718220-1718221(-) m6A 3'UTR       24209618 chr4:1718324-1718325(-) m6A 3'UTR       24284625 chr4:1718450-1718451(-) m6A 3'UTR       24284625//25456834 chr4:1718499-1718500(-) m6A 3'UTR       24284625//25456834 chr4:1718505-1718506(-) m6A 3'UTR       24284625//25456834 chr4:1718588-1718589(-) m6A 3'UTR       24284625 chr4:1718621-1718622(-) m6A 3'UTR//exon       24284625 chr4:1718724-1718725(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773536 chr4:1718753-1718754(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//27773536//22608085 chr4:1719000-1719001(-) m6A 3'UTR//CDS//exon       24284625//27773536 chr4:1719097-1719098(-) m6A 3'UTR//CDS//exon       24284625//27773536 chr4:1719124-1719125(-) m6A 3'UTR//CDS//exon       24284625//27773536 chr4:1719295-1719296(-) m6A 3'UTR//CDS//exon//intron       24284625//27773536 chr4:1719396-1719397(-) m6A 3'UTR//CDS//exon//intron       24284625//27773536 chr4:1719595-1719596(-) m6A exon//intron       24284625//24209618//25456834//24981863//27773536//22575960//22608085 chr4:1719616-1719617(-) m6A exon//intron       24284625//24209618//25456834//24981863//27773536//22575960//22608085 chr4:1719947-1719948(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr4:1719953-1719954(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr4:1720055-1720056(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr4:1720549-1720550(-) m6A 3'UTR//intron       24284625 chr4:1722460-1722461(-) m6A CDS       24284625//27773536 chr4:1722559-1722560(-) m6A CDS       24284625//25456834//24981863//27773536 chr4:1722633-1722634(-) m6A 5'UTR       25456834//24981863//27371828//27773536 chr4:1722697-1722698(-) m6A 5'UTR//intron       24209618//24981863//27371828//27773536 chr4:1722739-1722740(-) m6A 5'UTR//intron       24209618//24981863//27371828//27773536 chr4:1722781-1722782(-) m6A 5'UTR       25456834//24981863//27371828//27773536 chr4:1722823-1722824(-) m6A 5'UTR       24209618//25456834//24981863//27371828//27773536//22608085 chr4:1722865-1722866(-) m6A 5'UTR       24209618//25456834//24981863//27371828//27773536//22608085 chr4:1723036-1723037(-) m6A 5'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM129	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: TMEM129

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg