Basic Information:

  VIRBase ID:  

VHID00584075

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          LHX4:  NM_033343     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	LHX4
miRBase Accession/Entrez ID	MIMAT0031773	89884
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CPHD4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LHX4	chr1:180230727(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LHX4	chr1:180199462-180199463(+) m6A 5'UTR//exon       25456834 chr1:180199469-180199470(+) m6A 5'UTR//exon       25456834 chr1:180199480-180199481(+) m6A 5'UTR//exon       25456834 chr1:180199636-180199637(+) m6A 5'UTR//exon       24284625 chr1:180217458-180217459(+) m6A CDS//exon       24284625 chr1:180217482-180217483(+) m6A CDS//exon       24284625 chr1:180217518-180217519(+) m6A CDS//exon       24284625 chr1:180217539-180217540(+) m6A CDS//exon       24284625 chr1:180217581-180217582(+) m6A CDS//exon       24284625 chr1:180235705-180235706(+) m6A CDS       24284625 chr1:180235713-180235714(+) m6A CDS       24284625 chr1:180240546-180240547(+) m6A CDS       24284625 chr1:180240573-180240574(+) m6A CDS       24284625 chr1:180240595-180240596(+) m6A 3'UTR//CDS       24284625 chr1:180240642-180240643(+) m6A 3'UTR//CDS       24284625 chr1:180240652-180240653(+) m6A 3'UTR//CDS       24284625 chr1:180240982-180240983(+) m6A 3'UTR//CDS       24284625//24981863 chr1:180241011-180241012(+) m1A 3'UTR//CDS       26863196 chr1:180241105-180241106(+) m6A CDS       24284625//25456834//24981863//22608085 chr1:180243338-180243339(+) m6A CDS       24284625//25456834//24981863//22608085 chr1:180243389-180243390(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:180243423-180243424(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:180243428-180243429(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:180243442-180243443(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:180243544-180243545(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:180243614-180243615(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr1:180243714-180243715(+) m6A 3'UTR       24284625 chr1:180243779-180243780(+) m6A 3'UTR       24284625//24981863 chr1:180243867-180243868(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:180243912-180243913(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:180243924-180243925(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:180243960-180243961(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:180244065-180244066(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:180244106-180244107(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:180244123-180244124(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:180244129-180244130(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:180244182-180244183(+) m6A 3'UTR       24284625//24981863//22608085 chr1:180244196-180244197(+) m6A 3'UTR       24284625//24981863//22608085 chr1:180244241-180244242(+) m6A 3'UTR       24284625//22608085 chr1:180244270-180244271(+) m6A 3'UTR       24284625//22608085 chr1:180244324-180244325(+) m6A 3'UTR       27773535//22608085 chr1:180244338-180244339(+) m6A 3'UTR       24981863//27773535//22608085 chr1:180244437-180244438(+) m6A 3'UTR       27773535 chr1:180244518-180244519(+) m6A 3'UTR       27773535 chr1:180245325-180245326(+) m6A 3'UTR       25456834 chr1:180245334-180245335(+) m6A 3'UTR       25456834 chr1:180245371-180245372(+) m6A 3'UTR       25456834 chr1:180245380-180245381(+) m6A 3'UTR       25456834 chr1:180245401-180245402(+) m6A 3'UTR       25456834 chr1:180246377-180246378(+) m6A 3'UTR       - chr1:180247711-180247712(+) m6A 3'UTR       24284625 chr1:180247722-180247723(+) m6A 3'UTR       24284625 chr1:180247786-180247787(+) m6A 3'UTR       24284625 chr1:180247801-180247802(+) m6A 3'UTR       24284625 chr1:180247855-180247856(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LHX4	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: LHX4

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg