Basic Information:

  VIRBase ID:  

VHID00584047

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          SLC45A3:  NM_033102     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	SLC45A3
miRBase Accession/Entrez ID	MIMAT0031773	85414
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IPCA-2//IPCA-6//IPCA-8//IPCA6//PCANAP2//PCANAP6//PCANAP8//PRST

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC45A3	chr1:205640822(-) A-I      intronic chr1:205644008(-) A-I      intronic chr1:205643955(-) A-I      intronic chr1:205643941(-) A-I      intronic chr1:205644012(-) A-I      intronic chr1:205644043(-) A-I      intronic chr1:205643982(-) A-I      intronic chr1:205635602(-) A-I      intronic chr1:205644037(-) A-I      intronic chr1:205643972(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC45A3	chr1:205627238-205627239(-) m6A 3'UTR//exon       27773535 chr1:205627342-205627343(-) m6A 3'UTR//exon       27773535 chr1:205631973-205631974(-) m6A CDS       24981863 chr1:205632163-205632164(-) m6A CDS       24284625//27773536 chr1:205632367-205632368(-) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr1:205632454-205632455(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:205632460-205632461(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:205632520-205632521(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:205633939-205633940(-) m6A 5'UTR       24209618//24981863 chr1:205649569-205649570(-) m6A 5'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC45A3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: SLC45A3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg