Detail Information

Basic Information:


  VIRBase ID:  

VHID00583925

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:           AKT1S1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B22-3p AKT1S1
miRBase
Accession/Entrez ID
MIMAT0031773 84335
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - Lobe//PRAS40

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AKT1S1
chr19:50372564-50372565(-) m6A 3'UTR       24284625//27773535
chr19:50372628-50372629(-) m6A 3'UTR       24284625//27773535
chr19:50372809-50372810(-) m6A 3'UTR       27773535
chr19:50372899-50372900(-) Y 3'UTR       25219674//26075521
chr19:50372900-50372901(-) Y 3'UTR       25219674
chr19:50373077-50373078(-) m6A 3'UTR       24284625//27773535
chr19:50374838-50374839(-) m6A CDS       24284625
chr19:50374952-50374953(-) m6A CDS       24284625//24209618//27773535
chr19:50375085-50375086(-) m6A CDS       24284625//24209618//27773535//27371828
chr19:50375109-50375110(-) m6A CDS       24284625//24209618//27773535//27371828
chr19:50376209-50376210(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536
chr19:50376215-50376216(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536
chr19:50376247-50376248(-) m6A CDS       24284625//24209618//27773535//27371828//27773536
chr19:50376482-50376483(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960
chr19:50376673-50376674(-) m6A 5'UTR//intron       25456834//24981863//27773536
chr19:50376691-50376692(-) m6A 5'UTR//intron       25456834//24981863//27773536
chr19:50376733-50376734(-) m6A 5'UTR//intron       25456834//24981863//27773536
chr19:50376882-50376883(-) m6A 5'UTR//intron       27773535
chr19:50376895-50376896(-) m6A 5'UTR//intron       27773535
chr19:50376935-50376936(-) m6A 5'UTR//intron       27773535
chr19:50377206-50377207(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//22608085
chr19:50377227-50377228(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//22608085
chr19:50377267-50377268(-) m6A 5'UTR//intron       24284625//25456834//27371828//22608085
chr19:50377298-50377299(-) m6A 5'UTR//intron       24284625//25456834//27371828//22608085
chr19:50377381-50377382(-) m6A 5'UTR//intron       -
chr19:50377550-50377551(-) m6A 5'UTR//intron       24981863
chr19:50377643-50377644(-) m6A 5'UTR//intron       27773536
chr19:50377653-50377654(-) m6A 5'UTR//intron       27773536
chr19:50377663-50377664(-) m6A 5'UTR//intron       27773536
chr19:50380341-50380342(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:50380456-50380457(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr19:50380712-50380713(-) m6A 5'UTR//intron       24981863
chr19:50380812-50380813(-) m6A 5'UTR//intron       24284625//25456834//24981863//22608085
chr19:50380844-50380845(-) m6A 5'UTR//intron       24284625//25456834//24981863//22608085
chr19:50380888-50380889(-) m6A 5'UTR//intron       24284625//24981863
chr19:50380908-50380909(-) m6A 5'UTR//intron       24284625//24981863
chr19:50381273-50381274(-) m6A 5'UTR//intron       -
chr19:50381550-50381551(-) m6A 5'UTR//exon       -
chr19:50381578-50381579(-) m6A 5'UTR//exon       -
chr19:50381583-50381584(-) m6A 5'UTR//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate AKT1S1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B22-3p
Interactor2: AKT1S1

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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