Basic Information:

  VIRBase ID:  

VHID00583916

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          TMEM79:  NM_032323     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	TMEM79
miRBase Accession/Entrez ID	MIMAT0031773	84283
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MATT

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM79	chr1:156258229(+) A-I      intronic chr1:156258226(+) A-I      intronic chr1:156257494(+) A-I      intronic chr1:156257469(+) A-I      intronic chr1:156257461(+) A-I      intronic chr1:156259011(+) A-I      intronic chr1:156260878(+) A-I      intronic chr1:156259296(+) A-I      intronic chr1:156259145(+) A-I      intronic chr1:156259144(+) A-I      intronic chr1:156259010(+) A-I      intronic chr1:156259004(+) A-I      intronic chr1:156258367(+) A-I      intronic chr1:156258338(+) A-I      intronic chr1:156258329(+) A-I      intronic chr1:156258326(+) A-I      intronic chr1:156258265(+) A-I      intronic chr1:156258260(+) A-I      intronic chr1:156257609(+) A-I      intronic chr1:156257606(+) A-I      intronic chr1:156257589(+) A-I      intronic chr1:156257508(+) A-I      intronic chr1:156257498(+) A-I      intronic chr1:156259288(+) A-I      intronic chr1:156257485(+) A-I      intronic chr1:156257954(+) A-I      intronic chr1:156257477(+) A-I      intronic chr1:156258204(+) A-I      intronic chr1:156258403(+) A-I      intronic chr1:156257895(+) A-I      intronic chr1:156257086(+) A-I      intronic chr1:156257057(+) A-I      intronic chr1:156258182(+) A-I      intronic chr1:156258191(+) A-I      intronic chr1:156256922(+) A-I      intronic chr1:156257563(+) A-I      intronic chr1:156256660(+) A-I      intronic chr1:156259242(+) A-I      intronic chr1:156259249(+) A-I      intronic chr1:156257464(+) A-I      intronic chr1:156258255(+) A-I      intronic chr1:156259282(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TMEM79	chr1:156256963(+) T-C intron -    22484847 chr1:156257086(+) A-G intron -    22484847 chr1:156257665(+) T-C intron -    22484847 chr1:156259282(+) A-G intron -    22484847 chr1:156259288(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM79	chr1:156252728-156252729(+) m6A exon       24981863 chr1:156252768-156252769(+) m6A 5'UTR//exon       24981863 chr1:156252781-156252782(+) m6A 5'UTR//exon       24981863 chr1:156252810-156252811(+) m6A 5'UTR//exon       24284625//24981863 chr1:156254079-156254080(+) m6A 5'UTR//intron       24284625//24981863 chr1:156254099-156254100(+) m6A 5'UTR//intron       24284625//24981863 chr1:156255025-156255026(+) m6A CDS//exon       24284625 chr1:156255032-156255033(+) m6A CDS//exon       24284625 chr1:156255216-156255217(+) m6A CDS//exon//intron       24284625 chr1:156255254-156255255(+) m6A CDS//exon//intron       24284625 chr1:156255303-156255304(+) m6A CDS//exon//intron       24284625 chr1:156255310-156255311(+) m6A CDS//exon//intron       24284625 chr1:156255331-156255332(+) m6A CDS//exon//intron       24284625 chr1:156255447-156255448(+) m6A CDS//exon//intron       24284625 chr1:156255488-156255489(+) m6A CDS//exon//intron       24284625 chr1:156255597-156255598(+) m6A CDS//exon//intron       24284625 chr1:156255811-156255812(+) m6A exon//intron       - chr1:156261270-156261271(+) m6A CDS//exon       24284625 chr1:156261333-156261334(+) m6A CDS//exon       24284625//22575960 chr1:156261342-156261343(+) m6A CDS//exon       24284625//22575960 chr1:156261448-156261449(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261467-156261468(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261487-156261488(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261502-156261503(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261525-156261526(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261584-156261585(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261601-156261602(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261630-156261631(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261671-156261672(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr1:156261887-156261888(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261906-156261907(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156261931-156261932(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:156262026-156262027(+) m6A 3'UTR//exon//intron       24284625//24981863 chr1:156262069-156262070(+) m6A 3'UTR//exon//intron       - chr1:156262608-156262609(+) m6A exon       24284625//24981863//27773535//22608085 chr1:156262756-156262757(+) m6A exon       24284625//25456834//24981863//26404942//27773535//22608085 chr1:156262796-156262797(+) m6A exon       24284625//24981863//26404942//27773535//22608085 chr1:156262845-156262846(+) m6A exon       24284625//24981863//26404942//27773535//22608085 chr1:156262883-156262884(+) m6A exon       24284625//24981863//26404942//27773535 chr1:156262946-156262947(+) m6A exon       27773535 chr1:156262956-156262957(+) m6A exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM79	Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: TMEM79

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg