Basic Information:

  VIRBase ID:  

VHID00583622

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          GAL3ST4:  NM_024637     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	GAL3ST4
miRBase Accession/Entrez ID	MIMAT0031773	79690
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GAL3ST-4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GAL3ST4	chr7:99762140(-) A-I      intronic chr7:99762225(-) A-I      intronic chr7:99763737(-) A-I      intronic chr7:99762042(-) A-I      intronic chr7:99763725(-) A-I      intronic chr7:99762563(-) A-I      intronic chr7:99761263(-) A-I      intronic chr7:99762125(-) A-I      intronic chr7:99757299(-) A-I      3'UTR chr7:99757280(-) A-I      3'UTR chr7:99757267(-) A-I      3'UTR chr7:99757261(-) A-I      3'UTR chr7:99757260(-) A-I      3'UTR chr7:99757227(-) A-I      3'UTR chr7:99757154(-) A-I      3'UTR chr7:99759852(-) A-I      intronic chr7:99761197(-) A-I      intronic chr7:99762769(-) A-I      intronic chr7:99763665(-) A-I      intronic chr7:99761403(-) A-I      intronic chr7:99761210(-) A-I      intronic chr7:99763773(-) A-I      intronic chr7:99761452(-) A-I      intronic chr7:99762747(-) A-I      intronic chr7:99763438(-) A-I      intronic chr7:99763314(-) A-I      intronic chr7:99763336(-) A-I      intronic chr7:99761319(-) A-I      intronic chr7:99757203(-) A-I      3'UTR chr7:99757101(-) A-I      3'UTR chr7:99758971(-) A-I      intronic chr7:99763376(-) A-I      intronic chr7:99762176(-) A-I      intronic chr7:99763036(-) A-I      intronic chr7:99763387(-) A-I      intronic chr7:99759050(-) A-I      intronic chr7:99763664(-) A-I      intronic chr7:99763320(-) A-I      intronic chr7:99763257(-) A-I      intronic chr7:99763322(-) A-I      intronic chr7:99762565(-) A-I      intronic chr7:99761354(-) A-I      intronic chr7:99763741(-) A-I      intronic chr7:99762043(-) A-I      intronic chr7:99763260(-) A-I      intronic chr7:99763430(-) A-I      intronic chr7:99761395(-) A-I      intronic chr7:99759067(-) A-I      intronic chr7:99763272(-) A-I      intronic chr7:99762570(-) A-I      intronic chr7:99762770(-) A-I      intronic chr7:99762105(-) A-I      intronic chr7:99761250(-) A-I      intronic chr7:99763633(-) A-I      intronic chr7:99761282(-) A-I      intronic chr7:99761361(-) A-I      intronic chr7:99761255(-) A-I      intronic chr7:99763304(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GAL3ST4	chr7:99761235(-) T-C intron -    22484847 chr7:99761296(-) A-G intron -    22484847 chr7:99761354(-) A-G intron -    22484847 chr7:99761357(-) A-G intron -    22484847 chr7:99761361(-) A-G intron -    22484847 chr7:99761395(-) A-G intron -    22484847 chr7:99763036(-) A-G intron -    22484847 chr7:99763045(-) A-G intron -    22484847 chr7:99763272(-) A-G intron -    22484847 chr7:99763322(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GAL3ST4	chr7:99757542-99757543(-) m6A 3'UTR//exon       25456834//27371828 chr7:99757549-99757550(-) m6A 3'UTR//exon       25456834//27371828 chr7:99757573-99757574(-) m6A 3'UTR//CDS//exon       25456834//27371828 chr7:99757623-99757624(-) m6A 3'UTR//CDS//exon       25456834 chr7:99757671-99757672(-) m6A 3'UTR//CDS//exon       - chr7:99757796-99757797(-) m6A 3'UTR//CDS//exon       25456834//27371828 chr7:99757840-99757841(-) m6A 3'UTR//CDS//exon       25456834//27371828 chr7:99757914-99757915(-) m6A 3'UTR//CDS//exon       25456834//24981863//27371828 chr7:99757923-99757924(-) m6A 3'UTR//CDS//exon       25456834//24981863//27371828 chr7:99757956-99757957(-) m6A 3'UTR//CDS//exon       25456834//24981863//27371828 chr7:99757970-99757971(-) m6A 3'UTR//CDS//exon       25456834//24981863//27371828 chr7:99758006-99758007(-) m6A 3'UTR//CDS//exon       25456834//24981863//27371828 chr7:99758127-99758128(-) m6A CDS//exon       25456834 chr7:99758254-99758255(-) m6A CDS//exon       25456834//27371828 chr7:99758310-99758311(-) m6A CDS//exon       25456834//24981863//27371828 chr7:99758403-99758404(-) m6A CDS//exon       25456834//27371828 chr7:99758532-99758533(-) m6A CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GAL3ST4	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: GAL3ST4

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg