Basic Information:

  VIRBase ID:  

VHID00583593

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          TMEM43:  NM_024334     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	TMEM43
miRBase Accession/Entrez ID	MIMAT0031773	79188
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARVC5//ARVD5//EDMD7//LUMA

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TMEM43	chr3:14177909(+) G-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM43	chr3:14166483-14166484(+) m6A 5'UTR       24981863 chr3:14166526-14166527(+) m6A 5'UTR       25456834//24981863 chr3:14166620-14166621(+) m6A 5'UTR       24284625//24981863 chr3:14166657-14166658(+) m6A 5'UTR       24284625//24981863//22575960 chr3:14170359-14170360(+) m6A CDS//intron       24284625//24981863 chr3:14172447-14172448(+) m6A 3'UTR//CDS       24284625//22575960 chr3:14173095-14173096(+) m6A 3'UTR//CDS       24284625//22575960 chr3:14173123-14173124(+) m6A 3'UTR//CDS       24284625//22575960 chr3:14173160-14173161(+) m6A 3'UTR//CDS       24284625//27773535//22575960 chr3:14174401-14174402(+) m6A 3'UTR//CDS       24284625//24981863 chr3:14183265-14183266(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr3:14183299-14183300(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr3:14183400-14183401(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:14183432-14183433(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:14183576-14183577(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr3:14183626-14183627(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr3:14183786-14183787(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:14183801-14183802(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:14183826-14183827(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:14183845-14183846(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:14183873-14183874(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:14183904-14183905(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:14184059-14184060(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr3:14184064-14184065(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr3:14184073-14184074(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr3:14184089-14184090(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr3:14184102-14184103(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr3:14184232-14184233(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr3:14184314-14184315(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr3:14184432-14184433(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr3:14184860-14184861(+) m6A 3'UTR       26404942 chr3:14184951-14184952(+) m6A 3'UTR       24284625//26404942 chr3:14184975-14184976(+) m6A 3'UTR       24284625//26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM43	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: TMEM43

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg