Basic Information:

  VIRBase ID:  

VHID00583544

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          LRRC61:  NM_023942     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	LRRC61
miRBase Accession/Entrez ID	MIMAT0031773	65999
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HSPC295

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LRRC61	chr7:150022673(+) A-I      intronic chr7:150022829(+) A-I      intronic chr7:150022744(+) A-I      intronic chr7:150023609(+) A-I      intronic chr7:150032045(+) A-I      intronic chr7:150032141(+) A-I      intronic chr7:150032142(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	LRRC61	chr7:150028806(+) A-I exon 3'UTR    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LRRC61	chr7:150020140-150020141(+) m6A exon       27773536 chr7:150020175-150020176(+) m6A exon       - chr7:150023003-150023004(+) m6A 5'UTR//exon//intron       24284625 chr7:150025813-150025814(+) m6A exon//intron       24284625 chr7:150025871-150025872(+) m6A exon//intron       24284625//25456834//22608085 chr7:150026959-150026960(+) m6A intron       24981863//22608085 chr7:150027005-150027006(+) m6A intron       25456834//24981863//22608085 chr7:150027173-150027174(+) m6A intron       24284625//25456834//22575960//22608085 chr7:150027264-150027265(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150027329-150027330(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150027461-150027462(+) m6A intron       24284625//22575960//22608085 chr7:150027581-150027582(+) Y intron       26075521 chr7:150027725-150027726(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150027845-150027846(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150027887-150027888(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150028105-150028106(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150028224-150028225(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150028248-150028249(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150028373-150028374(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150028404-150028405(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150028438-150028439(+) m6A intron       24284625//25456834//24981863//22575960//22608085 chr7:150028485-150028486(+) Y intron       26075521 chr7:150028527-150028528(+) m6A intron       25456834//22608085 chr7:150029330-150029331(+) m6A intron       - chr7:150029385-150029386(+) m6A intron       25456834//24981863//22608085 chr7:150029408-150029409(+) m6A intron       24284625//25456834//24981863//22608085 chr7:150029513-150029514(+) m6A intron       25456834 chr7:150029609-150029610(+) Y intron       26075521 chr7:150033808-150033809(+) m6A 5'UTR       24284625//25456834//22608085 chr7:150033836-150033837(+) m6A 5'UTR       24284625//25456834//22575960//22608085 chr7:150033898-150033899(+) m6A 5'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150033954-150033955(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150033988-150033989(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034075-150034076(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034125-150034126(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034242-150034243(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034341-150034342(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034482-150034483(+) m6A CDS       24284625//25456834//22575960//22608085 chr7:150034488-150034489(+) m6A CDS       24284625//25456834//22575960//22608085 chr7:150034623-150034624(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034644-150034645(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034650-150034651(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:150034749-150034750(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150034907-150034908(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:150035083-150035084(+) m6A 3'UTR       24284625 chr7:150035126-150035127(+) m6A 3'UTR       24284625 chr7:150035157-150035158(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LRRC61	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: LRRC61

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg