Basic Information:

  VIRBase ID:  

VHID00581810

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          SERF2:  NR_037672     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	SERF2
miRBase Accession/Entrez ID	MIMAT0031773	10169
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	4F5REL//FAM2C//H4F5REL//HsT17089

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SERF2	chr15:44082728(+) A-I      intronic chr15:44086808(+) A-I      3'UTR chr15:44079327(+) A-I      intronic chr15:44082752(+) A-I      intronic chr15:44080273(+) A-I      intronic chr15:44082468(+) A-I      intronic chr15:44082700(+) A-I      intronic chr15:44082706(+) A-I      intronic chr15:44071075(+) A-I      intronic chr15:44071790(+) A-I      intronic chr15:44082707(+) A-I      intronic chr15:44082771(+) A-I      intronic chr15:44082847(+) A-I      intronic chr15:44070985(+) A-I      intronic chr15:44071002(+) A-I      intronic chr15:44071802(+) A-I      intronic chr15:44074267(+) A-I      intronic chr15:44082846(+) A-I      intronic chr15:44070973(+) A-I      intronic chr15:44071045(+) A-I      intronic chr15:44080184(+) A-I      intronic chr15:44082856(+) A-I      intronic chr15:44080166(+) A-I      intronic chr15:44077642(+) A-I      5'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SERF2	chr15:44069594-44069595(+) m6A 5'UTR//exon       25456834 chr15:44069603-44069604(+) m6A 5'UTR//exon       25456834 chr15:44069637-44069638(+) m6A 5'UTR//exon       25456834 chr15:44069681-44069682(+) m6A 5'UTR//exon       25456834 chr15:44084511-44084512(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr15:44084631-44084632(+) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:44085317-44085318(+) m6A exon//intron       24981863//27773535//27371828//22575960//22608085 chr15:44085328-44085329(+) m6A exon//intron       24981863//27773535//27371828//22575960//22608085 chr15:44085376-44085377(+) m6A exon//intron       24981863//27773535 chr15:44085909-44085910(+) m6A CDS//exon//intron       24981863 chr15:44085953-44085954(+) m1A CDS//exon//intron       26863196 chr15:44086353-44086354(+) m6A 3'UTR//intron       24981863 chr15:44086367-44086368(+) m6A 3'UTR//intron       24981863 chr15:44086489-44086490(+) m6A 3'UTR//intron       27773535 chr15:44086728-44086729(+) m6A 3'UTR//intron       27773535 chr15:44086815-44086816(+) m6A 3'UTR//intron       27773535 chr15:44087133-44087134(+) m6A 3'UTR//intron       - chr15:44087176-44087177(+) m6A 3'UTR//intron       - chr15:44087195-44087196(+) m6A 3'UTR//intron       - chr15:44087201-44087202(+) m6A 3'UTR//intron       - chr15:44089286-44089287(+) m6A intron       - chr15:44089313-44089314(+) m6A intron       - chr15:44089330-44089331(+) m6A intron       - chr15:44090668-44090669(+) m6A intron       27773535 chr15:44090679-44090680(+) m6A intron       27773535 chr15:44090725-44090726(+) m6A intron       27773535 chr15:44090750-44090751(+) m6A intron       27773535 chr15:44090787-44090788(+) m6A intron       27773535 chr15:44090808-44090809(+) m6A intron       27773535 chr15:44090817-44090818(+) m6A intron       27773535 chr15:44090831-44090832(+) m6A intron       27773535 chr15:44092094-44092095(+) m6A 3'UTR//intron       - chr15:44092107-44092108(+) m6A 3'UTR//intron       - chr15:44092265-44092266(+) m6A 3'UTR//intron       25456834 chr15:44092326-44092327(+) m6A 3'UTR//intron       25456834 chr15:44092548-44092549(+) m6A 3'UTR//intron       27773535 chr15:44092637-44092638(+) m6A 3'UTR//intron       27773535 chr15:44092648-44092649(+) m6A 3'UTR//intron       27773535 chr15:44092673-44092674(+) m6A 3'UTR//intron       27773535 chr15:44092700-44092701(+) m6A 3'UTR       - chr15:44092856-44092857(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr15:44092862-44092863(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44092870-44092871(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44092900-44092901(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44092920-44092921(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44093348-44093349(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960 chr15:44093376-44093377(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960 chr15:44093438-44093439(+) m6A intron       24284625//24209618//24981863//27773535//22575960 chr15:44093450-44093451(+) m6A intron       24981863//27773535 chr15:44093689-44093690(+) m6A intron       24209618//24981863//27773535 chr15:44093724-44093725(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960 chr15:44093837-44093838(+) m6A intron       24209618//27773535 chr15:44093880-44093881(+) m6A intron       22575960 chr15:44093958-44093959(+) m6A 3'UTR       24209618//27773535//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SERF2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: SERF2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg