Basic Information:

  VIRBase ID:  

VHID00581767

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:  MIMAT0031773          PDCD6IP:  NM_013374     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B22-3p	PDCD6IP
miRBase Accession/Entrez ID	MIMAT0031773	10015
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AIP1//ALIX//DRIP4//HP95

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PDCD6IP	chr3:33859254(+) A-I      intronic chr3:33859699(+) A-I      intronic chr3:33859739(+) A-I      intronic chr3:33846310(+) A-I      intronic chr3:33860085(+) A-I      intronic chr3:33860172(+) A-I      intronic chr3:33862724(+) A-I      intronic chr3:33862628(+) A-I      intronic chr3:33862518(+) A-I      intronic chr3:33865109(+) A-I      intronic chr3:33864385(+) A-I      intronic chr3:33862722(+) A-I      intronic chr3:33900191(+) A-I      intronic chr3:33878595(+) A-I      intronic chr3:33864423(+) A-I      intronic chr3:33865114(+) A-I      intronic chr3:33862631(+) A-I      intronic chr3:33852200(+) A-I      intronic chr3:33857743(+) A-I      intronic chr3:33857752(+) A-I      intronic chr3:33857779(+) A-I      intronic chr3:33849041(+) A-I      intronic chr3:33848131(+) A-I      intronic chr3:33890001(+) A-I      intronic chr3:33859253(+) A-I      intronic chr3:33860091(+) A-I      intronic chr3:33843066(+) A-I      intronic chr3:33847026(+) A-I      intronic chr3:33847036(+) A-I      intronic chr3:33847069(+) A-I      intronic chr3:33857787(+) A-I      intronic chr3:33857811(+) A-I      intronic chr3:33847084(+) A-I      intronic chr3:33852192(+) A-I      intronic chr3:33852226(+) A-I      intronic chr3:33852244(+) A-I      intronic chr3:33858000(+) A-I      intronic chr3:33859050(+) A-I      intronic chr3:33859062(+) A-I      intronic chr3:33859087(+) A-I      intronic chr3:33859089(+) A-I      intronic chr3:33859186(+) A-I      intronic chr3:33860150(+) A-I      intronic chr3:33846701(+) A-I      intronic chr3:33865219(+) A-I      intronic chr3:33857857(+) A-I      intronic chr3:33846768(+) A-I      intronic chr3:33852517(+) A-I      intronic chr3:33852178(+) A-I      intronic chr3:33877113(+) A-I      intronic chr3:33877090(+) A-I      intronic chr3:33859742(+) A-I      intronic chr3:33859017(+) A-I      intronic chr3:33846728(+) A-I      intronic chr3:33852199(+) A-I      intronic chr3:33846767(+) A-I      intronic chr3:33857877(+) A-I      intronic chr3:33846593(+) A-I      intronic chr3:33862549(+) A-I      intronic chr3:33846727(+) A-I      intronic chr3:33865026(+) A-I      intronic chr3:33846936(+) A-I      intronic chr3:33900181(+) A-I      intronic chr3:33878138(+) A-I      intronic chr3:33859124(+) A-I      intronic chr3:33865021(+) A-I      intronic chr3:33861702(+) A-I      intronic chr3:33900204(+) A-I      intronic chr3:33852645(+) A-I      intronic chr3:33847422(+) A-I      intronic chr3:33847185(+) A-I      intronic chr3:33900243(+) A-I      intronic chr3:33878592(+) A-I      intronic chr3:33877106(+) A-I      intronic chr3:33843055(+) A-I      intronic chr3:33898802(+) A-I      intronic chr3:33878271(+) A-I      intronic chr3:33862754(+) A-I      intronic chr3:33862625(+) A-I      intronic chr3:33857859(+) A-I      intronic chr3:33846629(+) A-I      intronic chr3:33861718(+) A-I      intronic chr3:33852237(+) A-I      intronic chr3:33861585(+) A-I      intronic chr3:33847330(+) A-I      intronic chr3:33852459(+) A-I      intronic chr3:33852495(+) A-I      intronic chr3:33865195(+) A-I      intronic chr3:33861575(+) A-I      intronic chr3:33852433(+) A-I      intronic chr3:33843064(+) A-I      intronic chr3:33847042(+) A-I      intronic chr3:33861574(+) A-I      intronic chr3:33849999(+) A-I      intronic chr3:33859187(+) A-I      intronic chr3:33860261(+) A-I      intronic chr3:33865194(+) A-I      intronic chr3:33847006(+) A-I      intronic chr3:33846594(+) A-I      intronic chr3:33864277(+) A-I      intronic chr3:33898753(+) A-I      intronic chr3:33846980(+) A-I      intronic chr3:33859098(+) A-I      intronic chr3:33859693(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PDCD6IP	chr3:33846661(+) A-G intron -    22484847 chr3:33846728(+) A-G intron -    22484847 chr3:33846936(+) A-G intron -    22484847 chr3:33847185(+) A-G intron -    22484847 chr3:33847330(+) A-G intron -    22484847 chr3:33852152(+) A-G intron -    22484847 chr3:33852178(+) A-G intron -    22484847 chr3:33852199(+) A-G intron -    22484847 chr3:33852201(+) A-G intron -    22484847 chr3:33852237(+) A-G intron -    22484847 chr3:33852495(+) A-G intron -    22484847 chr3:33861575(+) A-G intron -    22484847 chr3:33861585(+) A-G intron -    22484847 chr3:33862625(+) A-G intron -    22484847 chr3:33864337(+) G-A intron -    22484847 chr3:33865021(+) A-G intron -    22484847 chr3:33865026(+) A-G intron -    22484847 chr3:33878592(+) A-G intron -    22484847 chr3:33882518(+) C-T intron -    22484847 chr3:33882533(+) C-T intron -    22484847 chr3:33882534(+) C-T intron -    22484847 chr3:33898802(+) A-G intron -    22484847 chr3:33898873(+) A-G intron -    22484847 chr3:33900181(+) A-G intron -    22484847 chr3:33900243(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PDCD6IP	chr3:33839980-33839981(+) m6A 5'UTR       24284625//25456834//24981863//27773535//22608085 chr3:33840029-33840030(+) m6A 5'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr3:33840040-33840041(+) m6A 5'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr3:33840086-33840087(+) m6A 5'UTR       24284625//25456834//24981863//27773536//22575960//22608085 chr3:33840253-33840254(+) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr3:33840266-33840267(+) m6A CDS//exon       24284625//24981863//27773536//22575960//22608085 chr3:33840301-33840302(+) m6A CDS//exon       24284625//27773536//22575960//22608085 chr3:33840395-33840396(+) m6A CDS//exon       - chr3:33863522-33863523(+) m6A 3'UTR//CDS//exon//intron       26404942 chr3:33863527-33863528(+) m6A 3'UTR//CDS//exon//intron       26404942 chr3:33863564-33863565(+) m6A 3'UTR//CDS//exon//intron       26404942 chr3:33877674-33877675(+) m6A 3'UTR//CDS//exon       27773535 chr3:33883513-33883514(+) Y CDS//intron       26075521 chr3:33886974-33886975(+) Y CDS//exon       26075521 chr3:33894146-33894147(+) m6A CDS//exon       24981863 chr3:33894200-33894201(+) m6A CDS//exon       24981863 chr3:33894209-33894210(+) m6A CDS//exon       24981863 chr3:33895399-33895400(+) m6A CDS//exon       24981863 chr3:33896729-33896730(+) m6A CDS//exon       27773535 chr3:33896743-33896744(+) m6A CDS//exon       27773535 chr3:33896814-33896815(+) m6A exon//intron       27773535 chr3:33905499-33905500(+) m6A CDS//exon       24284625//24981863//27773535 chr3:33905524-33905525(+) m6A CDS//exon       24284625//24981863//27773535 chr3:33905578-33905579(+) m6A CDS//exon       24284625//24981863//27773535 chr3:33905612-33905613(+) m6A CDS//exon       24284625//24981863//27773535 chr3:33906830-33906831(+) m6A CDS//exon       24284625//24981863 chr3:33906889-33906890(+) m6A CDS//exon       24284625 chr3:33907935-33907936(+) m6A CDS//exon       24981863//26404942 chr3:33907953-33907954(+) m6A CDS//exon       24981863//26404942 chr3:33908089-33908090(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr3:33908125-33908126(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr3:33908221-33908222(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr3:33908285-33908286(+) m6A 3'UTR       24981863//26404942//27773535//22608085 chr3:33908298-33908299(+) m6A 3'UTR       24981863//26404942//27773535//22608085 chr3:33908329-33908330(+) m6A 3'UTR       24981863//26404942//27773535//22608085 chr3:33908340-33908341(+) m6A 3'UTR       24981863//26404942//27773535//22608085 chr3:33911077-33911078(+) m6A 3'UTR       27773535 chr3:33911130-33911131(+) m6A 3'UTR       27773535 chr3:33911143-33911144(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PDCD6IP	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B22-3p
Interactor2: PDCD6IP

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg