Detail Information

Basic Information:


  VIRBase ID:  

VHID00581026

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:           SPI1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B22-3p SPI1
miRBase
Accession/Entrez ID		 MIMAT0031773 6688
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - OF//PU.1//SFPI1//SPI-1//SPI-A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SPI1
chr11:47389541(-) A-I      intronic
chr11:47393846(-) A-I      intronic
chr11:47389538(-) A-I      intronic
chr11:47384223(-) A-I      intronic
chr11:47385771(-) A-I      intronic
chr11:47384224(-) A-I      intronic
chr11:47384295(-) A-I      intronic
chr11:47384296(-) A-I      intronic
chr11:47384906(-) A-I      intronic
chr11:47395196(-) A-I      intronic
chr11:47395168(-) A-I      intronic
chr11:47395152(-) A-I      intronic
chr11:47395099(-) A-I      intronic
chr11:47395090(-) A-I      intronic
chr11:47395033(-) A-I      intronic
chr11:47394859(-) A-I      intronic
chr11:47394820(-) A-I      intronic
chr11:47394736(-) A-I      intronic
chr11:47394734(-) A-I      intronic
chr11:47394730(-) A-I      intronic
chr11:47394669(-) A-I      intronic
chr11:47393870(-) A-I      intronic
chr11:47393869(-) A-I      intronic
chr11:47385770(-) A-I      intronic
chr11:47385765(-) A-I      intronic
chr11:47393836(-) A-I      intronic
chr11:47393767(-) A-I      intronic
chr11:47393745(-) A-I      intronic
chr11:47392776(-) A-I      intronic
chr11:47390691(-) A-I      intronic
chr11:47389441(-) A-I      intronic
chr11:47390631(-) A-I      intronic
chr11:47390625(-) A-I      intronic
chr11:47390617(-) A-I      intronic
chr11:47389784(-) A-I      intronic
chr11:47389672(-) A-I      intronic
chr11:47389660(-) A-I      intronic
chr11:47389577(-) A-I      intronic
chr11:47389576(-) A-I      intronic
chr11:47389533(-) A-I      intronic
chr11:47389514(-) A-I      intronic
chr11:47389498(-) A-I      intronic
chr11:47385749(-) A-I      intronic
chr11:47389469(-) A-I      intronic
chr11:47389381(-) A-I      intronic
chr11:47388993(-) A-I      intronic
chr11:47388983(-) A-I      intronic
chr11:47388948(-) A-I      intronic
chr11:47388860(-) A-I      intronic
chr11:47388846(-) A-I      intronic
chr11:47388367(-) A-I      intronic
chr11:47388333(-) A-I      intronic
chr11:47388286(-) A-I      intronic
chr11:47385745(-) A-I      intronic
chr11:47388276(-) A-I      intronic
chr11:47388260(-) A-I      intronic
chr11:47388228(-) A-I      intronic
chr11:47388206(-) A-I      intronic
chr11:47387396(-) A-I      intronic
chr11:47387340(-) A-I      intronic
chr11:47385131(-) A-I      intronic
chr11:47385141(-) A-I      intronic
chr11:47385257(-) A-I      intronic
chr11:47385348(-) A-I      intronic
chr11:47385389(-) A-I      intronic
chr11:47384302(-) A-I      intronic
chr11:47385391(-) A-I      intronic
chr11:47385401(-) A-I      intronic
chr11:47382211(-) A-I      intronic
chr11:47382173(-) A-I      intronic
chr11:47382160(-) A-I      intronic
chr11:47382135(-) A-I      intronic
chr11:47382134(-) A-I      intronic
chr11:47387320(-) A-I      intronic
chr11:47382483(-) A-I      intronic
chr11:47382505(-) A-I      intronic
chr11:47384889(-) A-I      intronic
chr11:47385733(-) A-I      intronic
chr11:47385445(-) A-I      intronic
chr11:47385802(-) A-I      intronic
chr11:47384303(-) A-I      intronic
chr11:47387285(-) A-I      intronic
chr11:47387283(-) A-I      intronic
chr11:47384972(-) A-I      intronic
chr11:47382560(-) A-I      intronic
chr11:47382668(-) A-I      intronic
chr11:47384397(-) A-I      intronic
chr11:47383918(-) A-I      intronic
chr11:47383938(-) A-I      intronic
chr11:47385437(-) A-I      intronic
chr11:47384011(-) A-I      intronic
chr11:47384014(-) A-I      intronic
chr11:47384039(-) A-I      intronic
chr11:47384040(-) A-I      intronic
chr11:47384061(-) A-I      intronic
chr11:47384996(-) A-I      intronic
chr11:47385830(-) A-I      intronic
chr11:47384066(-) A-I      intronic
chr11:47385804(-) A-I      intronic
chr11:47387386(-) A-I      intronic
chr11:47389902(-) A-I      intronic
chr11:47385302(-) A-I      intronic
chr11:47389447(-) A-I      intronic
chr11:47388845(-) A-I      intronic
chr11:47389804(-) A-I      intronic
chr11:47393753(-) A-I      intronic
chr11:47381776(-) A-I      intronic
chr11:47389511(-) A-I      intronic
chr11:47388848(-) A-I      intronic
chr11:47389908(-) A-I      intronic
chr11:47385331(-) A-I      intronic
chr11:47387452(-) A-I      intronic
chr11:47389864(-) A-I      intronic
chr11:47383949(-) A-I      intronic
chr11:47388840(-) A-I      intronic
chr11:47385739(-) A-I      intronic
chr11:47393784(-) A-I      intronic
chr11:47389532(-) A-I      intronic
chr11:47389433(-) A-I      intronic
chr11:47384001(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SPI1
chr11:47376433-47376434(-) m6A 3'UTR       -
chr11:47376551-47376552(-) m6A 3'UTR       28052920//27371828
chr11:47376588-47376589(-) m6A 3'UTR       28052920//27371828
chr11:47376671-47376672(-) m6A 3'UTR       28052920//27371828
chr11:47376706-47376707(-) m6A 3'UTR       28052920//27371828
chr11:47377006-47377007(-) m6A 3'UTR//CDS       27371828
chr11:47377012-47377013(-) m6A 3'UTR//CDS       27371828
chr11:47377030-47377031(-) m6A 3'UTR//CDS       27371828
chr11:47377057-47377058(-) m6A CDS       27371828
chr11:47380397-47380398(-) m6A CDS//intron       -
chr11:47397269-47397270(-) m6A CDS//intron       27371828
chr11:47400087-47400088(-) m6A 5'UTR       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SPI1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B22-3p
Interactor2: SPI1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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