Detail Information

Basic Information:


  VIRBase ID:  

VHID00580829

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B22-3p:           PURA:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B22-3p PURA
miRBase
Accession/Entrez ID
MIMAT0031773 5813
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - MRD31//PUR-ALPHA//PUR1//PURALPHA

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PURA
chr5:139487519-139487520(+) m6A exon       24284625//25456834//24981863
chr5:139487681-139487682(+) m6A exon       24284625
chr5:139492731-139492732(+) m6A exon//intron       24209618//25456834
chr5:139493773-139493774(+) m6A CDS//exon       24209618//24981863//27773536//22575960
chr5:139493779-139493780(+) m6A CDS//exon       24209618//24981863//27773536//22575960
chr5:139493965-139493966(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr5:139493974-139493975(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr5:139494157-139494158(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr5:139494220-139494221(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr5:139494250-139494251(+) m6A CDS       24284625//25456834//24981863//22575960//22608085
chr5:139494324-139494325(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr5:139494445-139494446(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr5:139494569-139494570(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr5:139494603-139494604(+) m1A CDS       26863196
chr5:139494681-139494682(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:139494718-139494719(+) m1A CDS       26863196
chr5:139494727-139494728(+) m1A CDS       26863196
chr5:139494739-139494740(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:139494749-139494750(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:139494860-139494861(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr5:139494893-139494894(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr5:139494970-139494971(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr5:139494990-139494991(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr5:139495025-139495026(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr5:139495059-139495060(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr5:139495090-139495091(+) m6A 3'UTR       24284625//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PURA
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B22-3p
Interactor2: PURA

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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