Basic Information:

  VIRBase ID:  

VHID00579385

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:  MIMAT0031772          PEF1:  NM_012392     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B14RC-3p	PEF1
miRBase Accession/Entrez ID	MIMAT0031772	553115
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ABP32//PEF1A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PEF1	chr1:32101958(-) A-I      intronic chr1:32101968(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PEF1	chr1:32095473-32095474(-) m6A 3'UTR       27773535 chr1:32095574-32095575(-) m6A 3'UTR       27773535 chr1:32095621-32095622(-) m6A 3'UTR       24284625//24981863 chr1:32095674-32095675(-) m6A 3'UTR       24284625//24981863 chr1:32095751-32095752(-) m6A 3'UTR       24284625 chr1:32096033-32096034(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:32096110-32096111(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:32096141-32096142(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:32096178-32096179(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:32096247-32096248(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:32096286-32096287(-) m6A CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085 chr1:32100826-32100827(-) m6A CDS//exon//intron       27371828 chr1:32100910-32100911(-) m6A CDS//exon//intron       27371828 chr1:32100921-32100922(-) m6A CDS//exon//intron       27371828 chr1:32100952-32100953(-) m6A CDS//exon//intron       27371828 chr1:32100979-32100980(-) m6A CDS//exon//intron       24981863//27371828 chr1:32101063-32101064(-) m6A CDS//exon//intron       24981863//27371828//22608085 chr1:32101102-32101103(-) m6A CDS//exon//intron       24981863//27371828//22608085 chr1:32110191-32110192(-) m6A exon//intron       24981863 chr1:32110198-32110199(-) m6A exon//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PEF1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B14RC-3p
Interactor2: PEF1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg