Detail Information

Basic Information:


  VIRBase ID:  

VHID00579255

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           CFAP77:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p CFAP77
miRBase
Accession/Entrez ID
MIMAT0031772 389799
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - C9orf171

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CFAP77
chr9:135313406(+) A-I      intronic
chr9:135313514(+) A-I      intronic
chr9:135405028(+) A-I      intronic
chr9:135425189(+) A-I      intronic
chr9:135427989(+) A-I      intronic
chr9:135313089(+) A-I      intronic
chr9:135313097(+) A-I      intronic
chr9:135427963(+) A-I      intronic
chr9:135427985(+) A-I      intronic
chr9:135358449(+) A-I      intronic
chr9:135358503(+) A-I      intronic
chr9:135358458(+) A-I      intronic
chr9:135358469(+) A-I      intronic
chr9:135405026(+) A-I      intronic
chr9:135358482(+) A-I      intronic
chr9:135313390(+) A-I      intronic
chr9:135313172(+) A-I      intronic
chr9:135313160(+) A-I      intronic
chr9:135313405(+) A-I      intronic
chr9:135358497(+) A-I      intronic
chr9:135313416(+) A-I      intronic
chr9:135313445(+) A-I      intronic
chr9:135313495(+) A-I      intronic
chr9:135313504(+) A-I      intronic
chr9:135358444(+) A-I      intronic
chr9:135427995(+) A-I      intronic
chr9:135313325(+) A-I      intronic
chr9:135313083(+) A-I      intronic
chr9:135395872(+) A-I      intronic
chr9:135426824(+) A-I      intronic
chr9:135315603(+) A-I      intronic
chr9:135313105(+) A-I      intronic
chr9:135313413(+) A-I      intronic
chr9:135309415(+) A-I      intronic
chr9:135314040(+) A-I      intronic
chr9:135313080(+) A-I      intronic
chr9:135313410(+) A-I      intronic
chr9:135313401(+) A-I      intronic
chr9:135379347(+) A-I      intronic
chr9:135315613(+) A-I      intronic
chr9:135313538(+) A-I      intronic
chr9:135313469(+) A-I      intronic
chr9:135379375(+) A-I      intronic
chr9:135314035(+) A-I      intronic
chr9:135440898(+) A-I      intronic
chr9:135312977(+) A-I      intronic
chr9:135425987(+) A-I      intronic
chr9:135313341(+) A-I      intronic
chr9:135440897(+) A-I      intronic
chr9:135427927(+) A-I      intronic
chr9:135313482(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CFAP77
chr9:135448498-135448499(+) m6A 3'UTR       25456834
chr9:135448512-135448513(+) m6A 3'UTR       25456834
chr9:135448567-135448568(+) m6A 3'UTR       25456834
chr9:135448575-135448576(+) m6A 3'UTR       25456834
chr9:135448610-135448611(+) m6A 3'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CFAP77
Exosome Blood     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: CFAP77

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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