Basic Information:

  VIRBase ID:  

VHID00579238

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:  MIMAT0031772          BEND4:  NM_207406     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B14RC-3p	BEND4
miRBase Accession/Entrez ID	MIMAT0031772	389206
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CCDC4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BEND4	chr4:42135763(-) A-I      intronic chr4:42128007(-) A-I      intronic chr4:42143642(-) A-I      intronic chr4:42144059(-) A-I      intronic chr4:42143994(-) A-I      intronic chr4:42144069(-) A-I      intronic chr4:42144053(-) A-I      intronic chr4:42144563(-) A-I      intronic chr4:42144570(-) A-I      intronic chr4:42144538(-) A-I      intronic chr4:42144195(-) A-I      intronic chr4:42144567(-) A-I      intronic chr4:42135760(-) A-I      intronic chr4:42143974(-) A-I      intronic chr4:42144528(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BEND4	chr4:42134659(-) A-G intron -    22484847 chr4:42135760(-) A-G intron -    22484847 chr4:42144195(-) A-G intron -    22484847 chr4:42144528(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BEND4	chr4:42118685-42118686(-) m6A 3'UTR       22608085 chr4:42118690-42118691(-) m6A 3'UTR       22608085 chr4:42118732-42118733(-) m6A 3'UTR       22608085 chr4:42118968-42118969(-) m6A 3'UTR       22608085 chr4:42118987-42118988(-) m6A 3'UTR       22608085 chr4:42118995-42118996(-) m6A 3'UTR       22608085 chr4:42119056-42119057(-) m6A 3'UTR       22608085 chr4:42119082-42119083(-) m6A 3'UTR       22608085 chr4:42119125-42119126(-) m6A 3'UTR       22608085 chr4:42119136-42119137(-) m6A 3'UTR       22608085 chr4:42119156-42119157(-) m6A 3'UTR       22608085 chr4:42119229-42119230(-) m6A 3'UTR       22608085 chr4:42119530-42119531(-) m6A 3'UTR       22608085 chr4:42119635-42119636(-) m6A 3'UTR//CDS       25456834//24981863//27371828//22608085 chr4:42119688-42119689(-) m6A 3'UTR//CDS       25456834//24981863//22608085 chr4:42122121-42122122(-) m6A CDS//intron       25456834//24981863//27371828//22608085 chr4:42122263-42122264(-) m6A CDS       24981863 chr4:42145618-42145619(-) m6A CDS       24981863//22608085 chr4:42145701-42145702(-) m6A CDS       24981863//22608085 chr4:42145774-42145775(-) m6A CDS       24981863//22608085 chr4:42145781-42145782(-) m6A CDS       24981863//22608085 chr4:42145809-42145810(-) m6A CDS       24981863//22608085 chr4:42145818-42145819(-) m6A CDS       24981863//22608085 chr4:42145825-42145826(-) m6A CDS       24981863//22608085 chr4:42145865-42145866(-) m6A CDS       24981863//22608085 chr4:42145929-42145930(-) m6A CDS       24981863//22608085 chr4:42145937-42145938(-) m6A CDS       24981863//22608085 chr4:42154058-42154059(-) m6A CDS//intron       27371828//27773536 chr4:42154178-42154179(-) m6A 5'UTR       27371828//27773536 chr4:42154248-42154249(-) m6A 5'UTR       24981863//27371828//27773536 chr4:42154282-42154283(-) m6A 5'UTR       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BEND4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B14RC-3p
Interactor2: BEND4

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg