Detail Information

Basic Information:


  VIRBase ID:  

VHID00579054

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           ARSI:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p ARSI
miRBase
Accession/Entrez ID
MIMAT0031772 340075
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ASI//SPG66

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ARSI
chr5:149676075-149676076(-) m6A 3'UTR       24981863
chr5:149676087-149676088(-) m6A 3'UTR       24209618//24981863
chr5:149676151-149676152(-) m6A 3'UTR       24209618//24981863
chr5:149676566-149676567(-) m6A 3'UTR       24209618//25456834//24981863
chr5:149676603-149676604(-) m6A 3'UTR       24209618//25456834//24981863
chr5:149676608-149676609(-) m6A 3'UTR       24209618//25456834//24981863
chr5:149676646-149676647(-) m6A 3'UTR       24209618//25456834//24981863
chr5:149676758-149676759(-) m6A 3'UTR       24209618//25456834//24981863
chr5:149676809-149676810(-) m6A CDS       24209618//25456834//24981863
chr5:149676963-149676964(-) m6A CDS       24209618//25456834//24981863
chr5:149677059-149677060(-) m6A CDS       24209618//25456834//24981863
chr5:149677134-149677135(-) m6A CDS       24209618//25456834//24981863
chr5:149677165-149677166(-) m6A CDS       24209618//25456834//24981863
chr5:149677197-149677198(-) m6A CDS       24209618//25456834
chr5:149677251-149677252(-) m6A CDS       24209618//25456834
chr5:149677468-149677469(-) m6A CDS       24209618//25456834//24981863
chr5:149677582-149677583(-) m6A CDS       24209618//25456834//24981863
chr5:149677959-149677960(-) m6A CDS       24209618//25456834//24981863
chr5:149678106-149678107(-) m6A 5'UTR//CDS       24981863
chr5:149678156-149678157(-) m6A 5'UTR//CDS       24981863
chr5:149681712-149681713(-) m6A CDS//intron       24981863
chr5:149682041-149682042(-) m6A 5'UTR//intron       24209618
chr5:149682062-149682063(-) m6A 5'UTR//intron       24209618
chr5:149682069-149682070(-) m6A 5'UTR//intron       24209618
chr5:149682074-149682075(-) m6A 5'UTR//intron       24209618
chr5:149682361-149682362(-) m6A 5'UTR//intron       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ARSI
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: ARSI

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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