Detail Information

Basic Information:


  VIRBase ID:  

VHID00578997

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           FAM83H:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p FAM83H
miRBase
Accession/Entrez ID		 MIMAT0031772 286077
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - AI3//AI3A

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FAM83H
chr8:144814681(-) A-I      intronic
chr8:144813157(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FAM83H
chr8:144806245-144806246(-) m6A 3'UTR       22575960
chr8:144806359-144806360(-) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960
chr8:144806389-144806390(-) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960
chr8:144806476-144806477(-) m6A 3'UTR       25456834//24981863//26404942//22575960
chr8:144806489-144806490(-) m6A 3'UTR       25456834//24981863//26404942//22575960
chr8:144806976-144806977(-) m6A 3'UTR//intron       25456834//22575960
chr8:144806987-144806988(-) m6A 3'UTR//intron       25456834//22575960
chr8:144807101-144807102(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22575960
chr8:144807125-144807126(-) m6A 3'UTR//intron       24284625//25456834//24981863//22575960
chr8:144807161-144807162(-) m6A 3'UTR//intron       25456834//24981863//22575960
chr8:144807219-144807220(-) m6A 3'UTR//intron       25456834
chr8:144807744-144807745(-) m6A 3'UTR       24284625
chr8:144807945-144807946(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144808020-144808021(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144808148-144808149(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085
chr8:144808329-144808330(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085
chr8:144808340-144808341(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085
chr8:144808367-144808368(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085
chr8:144809084-144809085(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144809255-144809256(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144809612-144809613(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144809633-144809634(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144809954-144809955(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960
chr8:144810040-144810041(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810059-144810060(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810104-144810105(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810127-144810128(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810176-144810177(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810248-144810249(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810297-144810298(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810365-144810366(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr8:144810526-144810527(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960
chr8:144810590-144810591(-) m6A CDS       24284625//24209618//25456834//27773536//22575960
chr8:144811166-144811167(-) m6A CDS       24284625//24981863//22575960
chr8:144811245-144811246(-) m6A CDS       24284625//24981863//22575960
chr8:144811368-144811369(-) m6A CDS       24284625//22575960
chr8:144811455-144811456(-) m6A CDS       24284625//22575960
chr8:144811473-144811474(-) m6A CDS       24284625//22575960
chr8:144812450-144812451(-) m6A CDS       24284625//25456834//24981863//26404942//27371828//22575960
chr8:144812456-144812457(-) m6A CDS       24284625//25456834//24981863//26404942//27371828//22575960
chr8:144812492-144812493(-) m6A CDS       24284625//25456834//24981863//26404942//27371828//22575960
chr8:144812566-144812567(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144812591-144812592(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr8:144812717-144812718(-) m6A CDS       24284625//27773536//22575960
chr8:144815878-144815879(-) m6A 5'UTR       24284625//27773536//22575960
chr8:144815927-144815928(-) m6A 5'UTR       24284625//27773536//22575960
chr8:144815936-144815937(-) m6A 5'UTR       24284625//27773536//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FAM83H
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: FAM83H

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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