Detail Information

Basic Information:


  VIRBase ID:  

VHID00578994

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           TCAF2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p TCAF2
miRBase
Accession/Entrez ID
MIMAT0031772 285966
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - FAM115C//FAM139A//GATD9

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TCAF2
chr7:143345111(+) A-I      intronic
chr7:143345092(+) A-I      intronic
chr7:143345086(+) A-I      intronic
chr7:143345075(+) A-I      intronic
chr7:143345073(+) A-I      intronic
chr7:143345195(+) A-I      intronic
chr7:143345173(+) A-I      intronic
chr7:143345169(+) A-I      intronic
chr7:143345138(+) A-I      intronic
chr7:143345112(+) A-I      intronic
chr7:143343478(+) A-I      intronic
chr7:143345060(+) A-I      intronic
chr7:143343482(+) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TCAF2
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: TCAF2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

Starting a new search, please wait ...