Basic Information:

  VIRBase ID:  

VHID00578774

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:  MIMAT0031772          TMED4:  NM_001303059     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B14RC-3p	TMED4
miRBase Accession/Entrez ID	MIMAT0031772	222068
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ERS25//GMP25iso//HNLF//p24a3//p24alpha3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMED4	chr7:44618327(-) A-I      3'UTR chr7:44618330(-) A-I      3'UTR chr7:44618341(-) A-I      3'UTR chr7:44618356(-) A-I      3'UTR chr7:44618365(-) A-I      3'UTR chr7:44618440(-) A-I      3'UTR chr7:44618459(-) A-I      3'UTR chr7:44618248(-) A-I      3'UTR chr7:44618321(-) A-I      3'UTR chr7:44618285(-) A-I      3'UTR chr7:44618317(-) A-I      3'UTR chr7:44618343(-) A-I      3'UTR chr7:44618427(-) A-I      3'UTR chr7:44618381(-) A-I      3'UTR chr7:44618299(-) A-I      3'UTR chr7:44618230(-) A-I      3'UTR chr7:44618282(-) A-I      3'UTR chr7:44618353(-) A-I      3'UTR chr7:44618308(-) A-I      3'UTR chr7:44618382(-) A-I      3'UTR chr7:44618378(-) A-I      3'UTR chr7:44618262(-) A-I      3'UTR chr7:44618273(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TMED4	chr7:44620289(-) A-I intron -    21960545 chr7:44619821(-) A-G intron -    22484847 chr7:44619833(-) A-G intron -    22484847 chr7:44619843(-) A-G intron -    22484847 chr7:44619885(-) A-G intron -    22484847 chr7:44619897(-) A-G intron -    22484847 chr7:44619911(-) A-G intron -    22484847 chr7:44620001(-) A-G intron -    22484847 chr7:44620289(-) A-G intron -    22484847 chr7:44620301(-) A-G intron -    22484847 chr7:44620302(-) A-G intron -    22484847 chr7:44620311(-) A-G intron -    22484847 chr7:44620381(-) A-G intron -    22484847 chr7:44620424(-) A-G intron -    22484847 chr7:44620470(-) A-G intron -    22484847 chr7:44620500(-) A-G intron -    22484847 chr7:44620508(-) A-G intron -    22484847 chr7:44620546(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMED4	chr7:44617497-44617498(-) m6A 3'UTR       27773535 chr7:44617590-44617591(-) m6A 3'UTR       27773535 chr7:44617630-44617631(-) m6A 3'UTR       27773535 chr7:44617699-44617700(-) m6A 3'UTR       22575960 chr7:44617769-44617770(-) m6A 3'UTR       25456834//24981863//22575960 chr7:44617795-44617796(-) m6A 3'UTR       25456834//24981863//22575960 chr7:44617807-44617808(-) m6A 3'UTR       25456834//24981863//22575960 chr7:44618259-44618260(-) m6A 3'UTR       24209618 chr7:44619154-44619155(-) m6A CDS       27371828 chr7:44619509-44619510(-) m6A 3'UTR//exon//intron       27371828 chr7:44620108-44620109(-) m6A 3'UTR//exon//intron       27773535 chr7:44620126-44620127(-) m6A 3'UTR//exon//intron       27773535 chr7:44621334-44621335(-) m6A CDS//exon       27773535 chr7:44621657-44621658(-) m6A CDS//exon       24981863//27371828//27773536 chr7:44621696-44621697(-) m6A CDS//exon       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMED4	Cytosol HeLa-S3 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B14RC-3p
Interactor2: TMED4

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg