Detail Information

Basic Information:


  VIRBase ID:  

VHID00578482

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           IRX2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p IRX2
miRBase
Accession/Entrez ID
MIMAT0031772 153572
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - IRXA2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IRX2
chr5:2746644-2746645(-) m6A 3'UTR       24981863
chr5:2746702-2746703(-) m6A 3'UTR       25456834//24981863
chr5:2746717-2746718(-) m6A 3'UTR       25456834//24981863
chr5:2746732-2746733(-) m6A 3'UTR       25456834//24981863
chr5:2746789-2746790(-) m6A 3'UTR       25456834//24981863
chr5:2746807-2746808(-) m6A 3'UTR       25456834//24981863
chr5:2748631-2748632(-) m6A CDS       25456834//24981863
chr5:2748640-2748641(-) m6A CDS       25456834//24981863
chr5:2748805-2748806(-) m6A CDS       25456834//24981863
chr5:2749048-2749049(-) m6A CDS       25456834//24981863
chr5:2749081-2749082(-) m6A CDS       25456834//24981863
chr5:2749147-2749148(-) m6A CDS       25456834//24981863
chr5:2749513-2749514(-) m6A CDS       25456834//24981863
chr5:2749599-2749600(-) m6A CDS       25456834//24981863
chr5:2749623-2749624(-) m6A CDS       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IRX2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: IRX2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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