Detail Information

Basic Information:


  VIRBase ID:  

VHID00575061

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           ATP10B:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p ATP10B
miRBase
Accession/Entrez ID
MIMAT0031772 23120
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ATPVB

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ATP10B
chr5:160099112(-) A-I      intronic
chr5:160109927(-) A-I      intronic
chr5:160109934(-) A-I      intronic
chr5:160130592(-) A-I      intronic
chr5:160095215(-) A-I      intronic
chr5:160099270(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ATP10B
chr5:159994193(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ATP10B
chr5:159992528-159992529(-) m6A CDS       25456834
chr5:159992558-159992559(-) m6A CDS       25456834
chr5:159992598-159992599(-) m6A CDS       25456834
chr5:159992645-159992646(-) m6A CDS       25456834
chr5:159992718-159992719(-) m6A CDS       25456834
chr5:159992723-159992724(-) m6A CDS       25456834
chr5:160047712-160047713(-) m6A CDS       25456834
chr5:160047793-160047794(-) m6A CDS       25456834
chr5:160047832-160047833(-) m6A CDS       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ATP10B
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: ATP10B

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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