Detail Information

Basic Information:


  VIRBase ID:  

VHID00573786

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           TRIM26:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p TRIM26
miRBase
Accession/Entrez ID		 MIMAT0031772 7726
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - AFP//RNF95//ZNF173

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TRIM26
chr6:30167686(-) A-I      intronic
chr6:30162508(-) A-I      intronic
chr6:30169441(-) A-I      intronic
chr6:30169497(-) A-I      intronic
chr6:30167618(-) A-I      intronic
chr6:30167546(-) A-I      intronic
chr6:30167510(-) A-I      intronic
chr6:30162669(-) A-I      intronic
chr6:30162647(-) A-I      intronic
chr6:30162550(-) A-I      intronic
chr6:30162532(-) A-I      intronic
chr6:30162520(-) A-I      intronic
chr6:30162497(-) A-I      intronic
chr6:30160435(-) A-I      intronic
chr6:30160428(-) A-I      intronic
chr6:30160412(-) A-I      intronic
chr6:30171331(-) A-I      intronic
chr6:30177580(-) A-I      intronic
chr6:30173427(-) A-I      intronic
chr6:30173394(-) A-I      intronic
chr6:30171461(-) A-I      intronic
chr6:30171445(-) A-I      intronic
chr6:30171444(-) A-I      intronic
chr6:30171398(-) A-I      intronic
chr6:30171397(-) A-I      intronic
chr6:30171389(-) A-I      intronic
chr6:30171388(-) A-I      intronic
chr6:30171387(-) A-I      intronic
chr6:30171357(-) A-I      intronic
chr6:30171318(-) A-I      intronic
chr6:30171282(-) A-I      intronic
chr6:30171220(-) A-I      intronic
chr6:30170897(-) A-I      intronic
chr6:30169586(-) A-I      intronic
chr6:30169568(-) A-I      intronic
chr6:30167983(-) A-I      intronic
chr6:30167868(-) A-I      intronic
chr6:30162484(-) A-I      intronic
chr6:30160431(-) A-I      intronic
chr6:30161129(-) A-I      intronic
chr6:30172815(-) A-I      intronic
chr6:30168009(-) A-I      intronic
chr6:30168053(-) A-I      intronic
chr6:30167609(-) A-I      intronic
chr6:30173380(-) A-I      intronic
chr6:30167959(-) A-I      intronic
chr6:30170949(-) A-I      intronic
chr6:30167680(-) A-I      intronic
chr6:30167865(-) A-I      intronic
chr6:30170893(-) A-I      intronic
chr6:30171095(-) A-I      intronic
chr6:30169509(-) A-I      intronic
chr6:30160330(-) A-I      intronic
chr6:30167876(-) A-I      intronic
chr6:30167447(-) A-I      intronic
chr6:30170928(-) A-I      intronic
chr6:30170989(-) A-I      intronic
chr6:30170888(-) A-I      intronic
chr6:30162671(-) A-I      intronic
chr6:30177834(-) A-I      intronic
chr6:30169581(-) A-I      intronic
chr6:30170918(-) A-I      intronic
chr6:30170980(-) A-I      intronic
chr6:30173398(-) A-I      intronic
chr6:30168018(-) A-I      intronic
chr6:30167804(-) A-I      intronic
chr6:30169499(-) A-I      intronic
chr6:30168045(-) A-I      intronic
chr6:30167552(-) A-I      intronic
chr6:30171330(-) A-I      intronic
chr6:30171467(-) A-I      intronic
chr6:30161044(-) A-I      intronic
chr6:30168012(-) A-I      intronic
chr6:30169379(-) A-I      intronic
chr6:30167947(-) A-I      intronic
chr6:30170856(-) A-I      intronic
chr6:30170988(-) A-I      intronic
chr6:30171602(-) A-I      intronic
chr6:30161183(-) A-I      intronic
chr6:30167669(-) A-I      intronic
chr6:30171097(-) A-I      intronic
chr6:30167813(-) A-I      intronic
chr6:30169433(-) A-I      intronic
chr6:30168002(-) A-I      intronic
chr6:30162492(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TRIM26
chr6:30152244-30152245(-) m6A 3'UTR//exon       27773535
chr6:30152459-30152460(-) m6A 3'UTR//exon       24284625//24981863//28052920//27773535//22608085
chr6:30152614-30152615(-) m6A 3'UTR//exon       24284625//24981863//27773535
chr6:30152701-30152702(-) m6A 3'UTR//exon       24284625//27773535
chr6:30152815-30152816(-) m6A 3'UTR//exon       24284625
chr6:30152836-30152837(-) m6A 3'UTR//exon       24284625
chr6:30152844-30152845(-) m6A 3'UTR//exon       24284625
chr6:30152874-30152875(-) m6A 3'UTR//exon       24284625
chr6:30153136-30153137(-) m6A 3'UTR//exon       24284625//24981863//27773535
chr6:30153188-30153189(-) m6A 3'UTR//exon       24981863
chr6:30153192-30153193(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535
chr6:30153252-30153253(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535
chr6:30153291-30153292(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535
chr6:30153302-30153303(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535
chr6:30153419-30153420(-) m6A 3'UTR//exon       24284625//24209618//27773535//22575960
chr6:30153543-30153544(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr6:30153592-30153593(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr6:30153658-30153659(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr6:30153675-30153676(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr6:30153745-30153746(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr6:30153920-30153921(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr6:30153941-30153942(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr6:30153998-30153999(-) m1A CDS//exon       26863196//26863410
chr6:30154121-30154122(-) m1A CDS//exon       26863196//26863410
chr6:30154280-30154281(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr6:30154319-30154320(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr6:30154929-30154930(-) m6A intron       27773535
chr6:30154953-30154954(-) m6A intron       27773535
chr6:30154960-30154961(-) m6A intron       27773535
chr6:30155024-30155025(-) m6A intron       27773535
chr6:30156946-30156947(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr6:30156960-30156961(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr6:30157231-30157232(-) m6A CDS//exon       24284625//24209618//27773535//22575960
chr6:30157251-30157252(-) m6A CDS//exon       24284625
chr6:30157279-30157280(-) m6A CDS//exon       24284625
chr6:30157792-30157793(-) m6A CDS//exon       27371828//27773536
chr6:30157801-30157802(-) m6A CDS//exon       27371828//27773536
chr6:30157810-30157811(-) m6A CDS//exon       27371828//27773536
chr6:30157926-30157927(-) m6A exon//intron       27371828//27773536
chr6:30164334-30164335(-) m6A CDS       24284625//24209618//27773535//27371828//27773536
chr6:30164433-30164434(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr6:30164445-30164446(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr6:30164509-30164510(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr6:30166257-30166258(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr6:30166263-30166264(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr6:30166287-30166288(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr6:30166629-30166630(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr6:30166650-30166651(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr6:30166689-30166690(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr6:30166806-30166807(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr6:30166891-30166892(-) m6A 5'UTR//intron       24284625//24209618//24981863//27773535//27371828//22608085
chr6:30166901-30166902(-) m6A 5'UTR//intron       24284625//24209618//24981863//27773535//27371828//22608085
chr6:30166923-30166924(-) m1A 5'UTR//intron       26863196
chr6:30172447-30172448(-) m6A 5'UTR//exon//intron       24284625//24209618//27773535
chr6:30172493-30172494(-) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535
chr6:30181084-30181085(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27773535
chr6:30181141-30181142(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27773535
chr6:30181148-30181149(-) m6A 5'UTR       24284625//25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TRIM26
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: TRIM26

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

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