Detail Information

Basic Information:


  VIRBase ID:  

VHID00573342

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           CCL3:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p CCL3
miRBase
Accession/Entrez ID
MIMAT0031772 6348
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - G0S19-1//LD78ALPHA//MIP-1-alpha//MIP1A//SCYA3

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CCL3
chr17:34416799-34416800(-) m6A exon//intron       26404942
chr17:34416836-34416837(-) m6A exon//intron       26404942
chr17:34416843-34416844(-) m6A exon//intron       26404942
chr17:34417469-34417470(-) m6A 5'UTR//exon       26404942
chr17:34417482-34417483(-) m6A 5'UTR//exon       26404942
chr17:34417493-34417494(-) m6A exon       26404942

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CCL3
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: CCL3

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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