Basic Information:

  VIRBase ID:  

VHID00572382

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:  MIMAT0031772          NR4A1:  NM_001202234     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B14RC-3p	NR4A1
miRBase Accession/Entrez ID	MIMAT0031772	3164
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GFRP1//HMR//N10//NAK-1//NGFIB//NP10//NUR77//TR3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NR4A1	chr12:52431555-52431556(+) m6A 5'UTR//intron       24284625 chr12:52431570-52431571(+) m6A 5'UTR//intron       24284625 chr12:52437213-52437214(+) m6A exon//intron       24284625 chr12:52439340-52439341(+) m6A CDS//intron       24981863 chr12:52445249-52445250(+) m6A 5'UTR//exon//intron       24981863//26404942 chr12:52445271-52445272(+) m6A 5'UTR//exon//intron       24284625//24981863//26404942//27371828 chr12:52445291-52445292(+) m6A 5'UTR//exon//intron       24284625//24981863//26404942//27371828 chr12:52445298-52445299(+) m6A 5'UTR//exon//intron       24284625//24981863//26404942//27371828 chr12:52445309-52445310(+) m6A 5'UTR//exon//intron       24284625//24981863//26404942//27371828 chr12:52446310-52446311(+) m6A 5'UTR//exon//intron       24981863 chr12:52446337-52446338(+) m6A 5'UTR//exon//intron       24981863 chr12:52446401-52446402(+) m6A 5'UTR//exon//intron       - chr12:52448047-52448048(+) m6A exon//intron       24981863 chr12:52448139-52448140(+) m6A 5'UTR//CDS//exon//intron       24284625//24209618//24981863//26404942 chr12:52448159-52448160(+) m6A 5'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942 chr12:52448218-52448219(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942 chr12:52448331-52448332(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:52448425-52448426(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:52448607-52448608(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:52448631-52448632(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:52448926-52448927(+) m6A CDS//exon//intron       26404942 chr12:52449054-52449055(+) m6A CDS//exon//intron       26404942 chr12:52449143-52449144(+) m6A exon//intron       26404942 chr12:52449182-52449183(+) m6A exon//intron       26404942 chr12:52449548-52449549(+) m6A exon//intron       26404942 chr12:52449560-52449561(+) m6A exon//intron       26404942 chr12:52449589-52449590(+) m6A exon//intron       26404942 chr12:52449607-52449608(+) m6A exon//intron       26404942 chr12:52449628-52449629(+) m6A exon//intron       26404942 chr12:52449699-52449700(+) m6A exon//intron       24981863//26404942 chr12:52449859-52449860(+) m6A CDS//exon//intron       26404942 chr12:52449871-52449872(+) m6A CDS//exon//intron       26404942 chr12:52449886-52449887(+) m6A CDS//exon//intron       26404942 chr12:52450391-52450392(+) m6A 5'UTR//CDS//exon//intron       26404942 chr12:52450413-52450414(+) m6A 5'UTR//CDS//exon//intron       26404942 chr12:52450418-52450419(+) m6A 5'UTR//CDS//exon//intron       26404942 chr12:52450519-52450520(+) m6A exon//intron       26404942 chr12:52452604-52452605(+) m6A CDS//exon       24284625//26404942 chr12:52452620-52452621(+) m6A CDS//exon       24284625//26404942 chr12:52452669-52452670(+) m6A CDS//exon       24284625//24981863//26404942 chr12:52452711-52452712(+) m6A CDS//exon       24284625//24981863//26404942//22575960 chr12:52452741-52452742(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960 chr12:52452796-52452797(+) m6A 3'UTR//exon       24284625//24981863//26404942 chr12:52452977-52452978(+) m6A 3'UTR//exon       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NR4A1	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B14RC-3p
Interactor2: NR4A1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg