Detail Information

Basic Information:


  VIRBase ID:  

VHID00571699

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:           CDKN2A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B14RC-3p CDKN2A
miRBase
Accession/Entrez ID		 MIMAT0031772 1029
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ARF//CDK4I//CDKN2//CMM2//INK4//INK4A//MLM//MTS-1//MTS1//P14//P14ARF//P16//P16-INK4A//P16INK4//P16INK4A//P19//P19ARF//TP16

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CDKN2A
chr9:21973986(-) A-I      intronic
chr9:21976678(-) A-I      intronic
chr9:21976376(-) A-I      intronic
chr9:21976543(-) A-I      intronic
chr9:21976632(-) A-I      intronic
chr9:21977544(-) A-I      intronic
chr9:21977564(-) A-I      intronic
chr9:21977461(-) A-I      intronic
chr9:21976296(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CDKN2A
chr9:21977461(-) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CDKN2A
chr9:21968193-21968194(-) m6A 3'UTR       24284625//27773535//22575960
chr9:21968203-21968204(-) m6A 3'UTR       24284625//27773535//22575960
chr9:21968222-21968223(-) m6A 3'UTR//CDS       24284625//27773535//22575960
chr9:21968757-21968758(-) m6A CDS//intron       -
chr9:21969584-21969585(-) m6A 3'UTR//exon//intron       -
chr9:21969604-21969605(-) m6A 3'UTR//exon//intron       -
chr9:21969636-21969637(-) m6A 3'UTR//exon//intron       -
chr9:21970893-21970894(-) m6A CDS//intron       27773536//22575960
chr9:21971010-21971011(-) m6A 3'UTR//CDS//exon       24284625//27773536//22575960
chr9:21971082-21971083(-) m6A 3'UTR//CDS//exon       24284625//27773536//22575960
chr9:21974526-21974527(-) m6A CDS//intron       27773535
chr9:21974886-21974887(-) m6A 5'UTR//intron       24284625//24981863//27773536//22575960
chr9:21974965-21974966(-) m6A 5'UTR//intron       24284625//27773536//22575960
chr9:21989542-21989543(-) m6A exon//intron       -
chr9:21989583-21989584(-) m6A exon//intron       -
chr9:21989608-21989609(-) m6A exon//intron       22608085
chr9:21989672-21989673(-) m6A exon//intron       22575960//22608085
chr9:21989713-21989714(-) m6A exon//intron       24284625//24981863//27773535//22575960//22608085
chr9:21989732-21989733(-) m6A exon//intron       24284625//24981863//27773535//22575960//22608085
chr9:21989756-21989757(-) m6A exon//intron       24284625//24981863//27371828//22575960//22608085
chr9:21989817-21989818(-) m6A exon//intron       24284625//22608085
chr9:21994141-21994142(-) m6A CDS//intron       27773536
chr9:21994331-21994332(-) m6A 5'UTR//intron       24284625//27773536//22575960
chr9:21994911-21994912(-) m6A 5'UTR       24284625
chr9:21995012-21995013(-) m6A 5'UTR       24284625//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CDKN2A
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B14RC-3p
Interactor2: CDKN2A

Evidence Support:


Prediction-Evidence PITA//RNAHybrid
Support Database VmiReg

Starting a new search, please wait ...