Basic Information:

  VIRBase ID:  

VHID00571489

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B14RC-3p:  MIMAT0031772          ATF3:  NM_001674     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B14RC-3p	ATF3
miRBase Accession/Entrez ID	MIMAT0031772	467
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position
Lncediting	ATF3	chr1: 212787266

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATF3	chr1:212789196(+) A-I      intronic chr1:212789732(+) A-I      intronic chr1:212789778(+) A-I      intronic chr1:212789231(+) A-I      intronic chr1:212789849(+) A-I      intronic chr1:212789916(+) A-I      intronic chr1:212788888(+) A-I      intronic chr1:212789719(+) A-I      intronic chr1:212788919(+) A-I      intronic chr1:212789066(+) A-I      intronic chr1:212745183(+) A-I      intronic chr1:212788911(+) A-I      intronic chr1:212787266(+) A-I      ncRNA chr1:212789217(+) A-I      intronic chr1:212789116(+) A-I      intronic chr1:212789101(+) A-I      intronic chr1:212789025(+) A-I      intronic chr1:212789232(+) A-I      intronic chr1:212789042(+) A-I      intronic chr1:212788966(+) A-I      intronic chr1:212753840(+) A-I      intronic chr1:212787786(+) A-I      intronic chr1:212788942(+) A-I      intronic chr1:212789199(+) A-I      intronic chr1:212789088(+) A-I      intronic chr1:212787744(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ATF3	chr1:212787266(+) A-I intron -    19478186   //21960545 chr1:212789217(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATF3	chr1:212782216-212782217(+) m6A 5'UTR//exon//intron       24981863 chr1:212788514-212788515(+) m6A 5'UTR//CDS//exon//intron       27773535 chr1:212788572-212788573(+) m6A CDS//exon//intron       24981863//27773535 chr1:212791541-212791542(+) m6A CDS//exon//intron       24981863//27773535 chr1:212791660-212791661(+) m6A exon//intron       27773535//22608085 chr1:212791970-212791971(+) m6A exon//intron       24981863 chr1:212792107-212792108(+) m6A exon//intron       25456834//24981863 chr1:212792731-212792732(+) m6A 3'UTR//CDS//exon       24209618//24981863//22608085 chr1:212792834-212792835(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//22608085 chr1:212792853-212792854(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//22608085 chr1:212792882-212792883(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//22608085 chr1:212792956-212792957(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//22608085 chr1:212793015-212793016(+) m6A 3'UTR//exon       24284625//24981863//26404942//22608085 chr1:212793084-212793085(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr1:212793206-212793207(+) m6A 3'UTR//exon       24284625//24981863 chr1:212793322-212793323(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535 chr1:212793408-212793409(+) m6A 3'UTR//exon       24284625//24981863//27773535 chr1:212793573-212793574(+) m6A 3'UTR//exon       24284625 chr1:212793637-212793638(+) m6A 3'UTR//exon       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ATF3	Chromatin K562 cells     - Cytoplasm Human hepatoma cell line (HepG2)     16109718 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B14RC-3p
Interactor2: ATF3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg