Detail Information

Basic Information:


  VIRBase ID:  

VHID00570679

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B26-5p:           SLC12A8:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B26-5p SLC12A8
miRBase
Accession/Entrez ID		 MIMAT0031771 84561
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - CCC9

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SLC12A8
chr3:124824817(-) A-I      intronic
chr3:124878987(-) A-I      intronic
chr3:124819348(-) A-I      intronic
chr3:124818770(-) A-I      intronic
chr3:124818686(-) A-I      intronic
chr3:124818660(-) A-I      intronic
chr3:124818607(-) A-I      intronic
chr3:124889594(-) A-I      intronic
chr3:124836358(-) A-I      intronic
chr3:124836332(-) A-I      intronic
chr3:124836331(-) A-I      intronic
chr3:124836324(-) A-I      intronic
chr3:124836318(-) A-I      intronic
chr3:124836228(-) A-I      intronic
chr3:124874426(-) A-I      intronic
chr3:124874587(-) A-I      intronic
chr3:124825426(-) A-I      intronic
chr3:124878996(-) A-I      intronic
chr3:124881903(-) A-I      intronic
chr3:124881951(-) A-I      intronic
chr3:124881976(-) A-I      intronic
chr3:124889569(-) A-I      intronic
chr3:124833429(-) A-I      intronic
chr3:124833392(-) A-I      intronic
chr3:124833380(-) A-I      intronic
chr3:124833379(-) A-I      intronic
chr3:124833368(-) A-I      intronic
chr3:124833365(-) A-I      intronic
chr3:124833361(-) A-I      intronic
chr3:124825456(-) A-I      intronic
chr3:124825427(-) A-I      intronic
chr3:124850288(-) A-I      intronic
chr3:124825425(-) A-I      intronic
chr3:124825422(-) A-I      intronic
chr3:124836380(-) A-I      intronic
chr3:124837238(-) A-I      intronic
chr3:124837276(-) A-I      intronic
chr3:124837390(-) A-I      intronic
chr3:124837427(-) A-I      intronic
chr3:124843273(-) A-I      intronic
chr3:124843299(-) A-I      intronic
chr3:124844327(-) A-I      intronic
chr3:124844370(-) A-I      intronic
chr3:124844371(-) A-I      intronic
chr3:124844381(-) A-I      intronic
chr3:124850261(-) A-I      intronic
chr3:124825359(-) A-I      intronic
chr3:124825340(-) A-I      intronic
chr3:124825315(-) A-I      intronic
chr3:124825229(-) A-I      intronic
chr3:124824792(-) A-I      intronic
chr3:124824774(-) A-I      intronic
chr3:124824766(-) A-I      intronic
chr3:124824762(-) A-I      intronic
chr3:124824757(-) A-I      intronic
chr3:124824742(-) A-I      intronic
chr3:124824739(-) A-I      intronic
chr3:124824726(-) A-I      intronic
chr3:124824717(-) A-I      intronic
chr3:124825385(-) A-I      intronic
chr3:124824706(-) A-I      intronic
chr3:124818590(-) A-I      intronic
chr3:124825415(-) A-I      intronic
chr3:124899334(-) A-I      intronic
chr3:124901466(-) A-I      intronic
chr3:124917684(-) A-I      intronic
chr3:124917894(-) A-I      intronic
chr3:124919075(-) A-I      intronic
chr3:124919126(-) A-I      intronic
chr3:124920876(-) A-I      intronic
chr3:124920925(-) A-I      intronic
chr3:124920930(-) A-I      intronic
chr3:124824652(-) A-I      intronic
chr3:124920931(-) A-I      intronic
chr3:124824711(-) A-I      intronic
chr3:124824644(-) A-I      intronic
chr3:124824621(-) A-I      intronic
chr3:124823246(-) A-I      intronic
chr3:124823232(-) A-I      intronic
chr3:124823226(-) A-I      intronic
chr3:124823172(-) A-I      intronic
chr3:124822642(-) A-I      intronic
chr3:124822433(-) A-I      intronic
chr3:124819745(-) A-I      intronic
chr3:124819735(-) A-I      intronic
chr3:124819498(-) A-I      intronic
chr3:124819390(-) A-I      intronic
chr3:124825292(-) A-I      intronic
chr3:124837285(-) A-I      intronic
chr3:124843231(-) A-I      intronic
chr3:124824752(-) A-I      intronic
chr3:124837404(-) A-I      intronic
chr3:124825424(-) A-I      intronic
chr3:124818733(-) A-I      intronic
chr3:124899423(-) A-I      intronic
chr3:124833297(-) A-I      intronic
chr3:124824691(-) A-I      intronic
chr3:124822387(-) A-I      intronic
chr3:124843350(-) A-I      intronic
chr3:124837224(-) A-I      intronic
chr3:124849273(-) A-I      intronic
chr3:124844303(-) A-I      intronic
chr3:124919109(-) A-I      intronic
chr3:124833489(-) A-I      intronic
chr3:124825404(-) A-I      intronic
chr3:124844222(-) A-I      intronic
chr3:124853084(-) A-I      intronic
chr3:124824765(-) A-I      intronic
chr3:124833304(-) A-I      intronic
chr3:124833490(-) A-I      intronic
chr3:124818769(-) A-I      intronic
chr3:124823028(-) A-I      intronic
chr3:124804963(-) A-I      intronic
chr3:124818616(-) A-I      intronic
chr3:124822510(-) A-I      intronic
chr3:124824791(-) A-I      intronic
chr3:124920008(-) A-I      intronic
chr3:124823104(-) A-I      intronic
chr3:124802466(-) A-I      3'UTR
chr3:124802483(-) A-I      3'UTR
chr3:124802489(-) A-I      3'UTR
chr3:124802484(-) A-I      3'UTR
chr3:124802479(-) A-I      3'UTR
chr3:124802333(-) A-I      3'UTR
chr3:124802323(-) A-I      3'UTR
chr3:124822514(-) A-I      intronic
chr3:124837288(-) A-I      intronic
chr3:124822756(-) A-I      intronic
chr3:124919257(-) A-I      intronic
chr3:124824811(-) A-I      intronic
chr3:124804822(-) A-I      intronic
chr3:124837459(-) A-I      intronic
chr3:124916431(-) A-I      intronic
chr3:124819434(-) A-I      intronic
chr3:124837397(-) A-I      intronic
chr3:124824630(-) A-I      intronic
chr3:124806054(-) A-I      intronic
chr3:124837421(-) A-I      intronic
chr3:124825345(-) A-I      intronic
chr3:124824805(-) A-I      intronic
chr3:124818610(-) A-I      intronic
chr3:124822677(-) A-I      intronic
chr3:124837302(-) A-I      intronic
chr3:124824601(-) A-I      intronic
chr3:124833337(-) A-I      intronic
chr3:124836426(-) A-I      intronic
chr3:124824734(-) A-I      intronic
chr3:124824730(-) A-I      intronic
chr3:124823025(-) A-I      intronic
chr3:124819389(-) A-I      intronic
chr3:124825428(-) A-I      intronic
chr3:124901622(-) A-I      intronic
chr3:124819524(-) A-I      intronic
chr3:124818516(-) A-I      intronic
chr3:124825412(-) A-I      intronic
chr3:124902954(-) A-I      intronic
chr3:124899374(-) A-I      intronic
chr3:124837405(-) A-I      intronic
chr3:124882076(-) A-I      intronic
chr3:124833470(-) A-I      intronic
chr3:124816063(-) A-I      intronic
chr3:124917420(-) A-I      intronic
chr3:124825431(-) A-I      intronic
chr3:124819341(-) A-I      intronic
chr3:124819601(-) A-I      intronic
chr3:124833464(-) A-I      intronic
chr3:124824682(-) A-I      intronic
chr3:124917760(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SLC12A8
chr3:124801661(-) A-I exon 3'UTR    15342557
chr3:124801717(-) A-I exon 3'UTR    15342557
chr3:124802231(-) A-I exon 3'UTR    15342557
chr3:124802323(-) A-I exon 3'UTR    15342557
chr3:124802324(-) A-I exon 3'UTR    15342557
chr3:124802333(-) A-I exon 3'UTR    15342557
chr3:124802466(-) A-I exon 3'UTR    15342557
chr3:124802479(-) A-I exon 3'UTR    15342557
chr3:124802483(-) A-I exon 3'UTR    15342557
chr3:124802489(-) A-I exon 3'UTR    15342557
chr3:124802503(-) A-I exon 3'UTR    15342557
chr3:124837684(-) A-I exon CDS    15342557
chr3:124829461(-) A-I intron -    21960545
chr3:124802483(-) A-G exon 3'UTR    22484847
chr3:124802484(-) A-G exon 3'UTR    22484847
chr3:124804755(-) G-A intron -    22484847
chr3:124804756(-) A-G intron -    22484847
chr3:124806057(-) C-T intron -    22484847
chr3:124806233(-) T-C intron -    22484847
chr3:124808629(-) G-A intron -    22484847
chr3:124816057(-) G-A intron -    22484847
chr3:124816063(-) A-G intron -    22484847
chr3:124816244(-) T-C intron -    22484847
chr3:124818516(-) A-G intron -    22484847
chr3:124818610(-) A-G intron -    22484847
chr3:124818616(-) A-G intron -    22484847
chr3:124818733(-) A-G intron -    22484847
chr3:124818769(-) A-G intron -    22484847
chr3:124819341(-) A-G intron -    22484847
chr3:124819389(-) A-G intron -    22484847
chr3:124819431(-) A-G intron -    22484847
chr3:124819434(-) A-G intron -    22484847
chr3:124819601(-) A-G intron -    22484847
chr3:124822327(-) C-T intron -    22484847
chr3:124822384(-) A-G intron -    22484847
chr3:124822387(-) A-G intron -    22484847
chr3:124822447(-) A-G intron -    22484847
chr3:124822615(-) A-G intron -    22484847
chr3:124822756(-) A-G intron -    22484847
chr3:124823028(-) A-G intron -    22484847
chr3:124824682(-) A-G intron -    22484847
chr3:124824691(-) A-G intron -    22484847
chr3:124824708(-) A-G intron -    22484847
chr3:124824725(-) A-G intron -    22484847
chr3:124824730(-) A-G intron -    22484847
chr3:124824734(-) A-G intron -    22484847
chr3:124824752(-) A-G intron -    22484847
chr3:124824765(-) A-G intron -    22484847
chr3:124824791(-) A-G intron -    22484847
chr3:124824805(-) A-G intron -    22484847
chr3:124824811(-) A-G intron -    22484847
chr3:124824822(-) A-G intron -    22484847
chr3:124825292(-) A-G intron -    22484847
chr3:124825344(-) A-G intron -    22484847
chr3:124825345(-) A-G intron -    22484847
chr3:124825363(-) A-G intron -    22484847
chr3:124825404(-) A-G intron -    22484847
chr3:124825408(-) A-G intron -    22484847
chr3:124825412(-) A-G intron -    22484847
chr3:124825424(-) A-G intron -    22484847
chr3:124825428(-) A-G intron -    22484847
chr3:124825431(-) A-G intron -    22484847
chr3:124827311(-) A-G intron -    22484847
chr3:124833304(-) A-G intron -    22484847
chr3:124833336(-) A-G intron -    22484847
chr3:124833337(-) A-G intron -    22484847
chr3:124833401(-) A-G intron -    22484847
chr3:124833464(-) A-G intron -    22484847
chr3:124833465(-) A-G intron -    22484847
chr3:124833470(-) A-G intron -    22484847
chr3:124833489(-) A-G intron -    22484847
chr3:124833490(-) A-G intron -    22484847
chr3:124836426(-) A-G intron -    22484847
chr3:124837224(-) A-G intron -    22484847
chr3:124837265(-) A-G intron -    22484847
chr3:124837285(-) A-G intron -    22484847
chr3:124837288(-) A-G intron -    22484847
chr3:124837302(-) A-G intron -    22484847
chr3:124837397(-) A-G intron -    22484847
chr3:124837404(-) A-G intron -    22484847
chr3:124837405(-) A-G intron -    22484847
chr3:124837421(-) A-G intron -    22484847
chr3:124837459(-) A-G intron -    22484847
chr3:124843231(-) A-G intron -    22484847
chr3:124843350(-) A-G intron -    22484847
chr3:124844303(-) A-G intron -    22484847
chr3:124882076(-) A-G intron -    22484847
chr3:124891941(-) A-G intron -    22484847
chr3:124901622(-) A-G intron -    22484847
chr3:124916431(-) A-G intron -    22484847
chr3:124917292(-) A-G intron -    22484847
chr3:124917760(-) A-G intron -    22484847
chr3:124919109(-) A-G intron -    22484847
chr3:124919257(-) A-G intron -    22484847
chr3:124920408(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SLC12A8
chr3:124801534-124801535(-) m6A 3'UTR       27773535
chr3:124802109-124802110(-) m6A 3'UTR//exon       25456834//24981863//28052920//27773535
chr3:124802117-124802118(-) m6A 3'UTR//exon       25456834//24981863//28052920//27773535
chr3:124802128-124802129(-) m6A 3'UTR//exon       25456834//24981863//28052920//27773535
chr3:124802215-124802216(-) m6A 3'UTR//exon       25456834//28052920//27773535//22608085
chr3:124802242-124802243(-) m6A 3'UTR//exon       25456834//28052920//27773535//22608085
chr3:124802263-124802264(-) m6A 3'UTR//exon       28052920//27773535
chr3:124802561-124802562(-) m6A 3'UTR//exon       28052920//27773535
chr3:124802607-124802608(-) m6A 3'UTR//exon       24981863//28052920//27773535
chr3:124802632-124802633(-) m6A 3'UTR//exon       24981863//28052920//27773535
chr3:124802639-124802640(-) m6A 3'UTR//exon       24981863//28052920//27773535
chr3:124802671-124802672(-) m6A 3'UTR//exon       24981863//28052920//27773535
chr3:124802684-124802685(-) m6A 3'UTR//exon       24981863//28052920//27773535
chr3:124802719-124802720(-) m6A 3'UTR//exon       27773535
chr3:124802761-124802762(-) m6A 3'UTR//CDS//exon       27773535
chr3:124826381-124826382(-) m6A 3'UTR//CDS//exon       25456834//28052920//27773535
chr3:124826396-124826397(-) m6A 3'UTR//CDS//exon       25456834//28052920//27773535
chr3:124826414-124826415(-) m6A 3'UTR//CDS//exon       24284625//25456834//28052920//27773535
chr3:124826422-124826423(-) m6A 3'UTR//CDS//exon       24284625//25456834//28052920//27773535
chr3:124826506-124826507(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//28052920//27773535//22608085
chr3:124826531-124826532(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//28052920//27773535//22608085
chr3:124826576-124826577(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//28052920//27773535//22608085
chr3:124826647-124826648(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//28052920//27773535//22608085
chr3:124826694-124826695(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//28052920//27773535//22608085
chr3:124826833-124826834(-) m6A 3'UTR//CDS//exon//intron       24284625//28052920
chr3:124826954-124826955(-) m6A 3'UTR//CDS//exon//intron       27773535
chr3:124826959-124826960(-) m6A 3'UTR//CDS//exon//intron       27773535
chr3:124829038-124829039(-) m6A 3'UTR//CDS//exon       27773535
chr3:124829348-124829349(-) m6A exon//intron       -
chr3:124829393-124829394(-) m6A exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SLC12A8
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B26-5p
Interactor2: SLC12A8

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

Starting a new search, please wait ...