Basic Information:

  VIRBase ID:  

VHID00570365

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B26-5p:  MIMAT0031771          AGTRAP:  NM_001040195     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B26-5p	AGTRAP
miRBase Accession/Entrez ID	MIMAT0031771	57085
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATRAP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AGTRAP	chr1:11803334(+) A-I      intronic chr1:11799353(+) A-I      intronic chr1:11804146(+) A-I      intronic chr1:11804123(+) A-I      intronic chr1:11802727(+) A-I      intronic chr1:11802717(+) A-I      intronic chr1:11804174(+) A-I      intronic chr1:11802692(+) A-I      intronic chr1:11799458(+) A-I      intronic chr1:11799412(+) A-I      intronic chr1:11799398(+) A-I      intronic chr1:11799407(+) A-I      intronic chr1:11799457(+) A-I      intronic chr1:11803421(+) A-I      intronic chr1:11803406(+) A-I      intronic chr1:11803403(+) A-I      intronic chr1:11802705(+) A-I      intronic chr1:11802649(+) A-I      intronic chr1:11804127(+) A-I      intronic chr1:11804221(+) A-I      intronic chr1:11804172(+) A-I      intronic chr1:11799461(+) A-I      intronic chr1:11803809(+) A-I      intronic chr1:11803823(+) A-I      intronic chr1:11799452(+) A-I      intronic chr1:11803723(+) A-I      intronic chr1:11804099(+) A-I      intronic chr1:11804992(+) A-I      intronic chr1:11803875(+) A-I      intronic chr1:11805146(+) A-I      intronic chr1:11805029(+) A-I      intronic chr1:11804211(+) A-I      intronic chr1:11803769(+) A-I      intronic chr1:11804201(+) A-I      intronic chr1:11802753(+) A-I      intronic chr1:11804277(+) A-I      intronic chr1:11804976(+) A-I      intronic chr1:11804182(+) A-I      intronic chr1:11803806(+) A-I      intronic chr1:11804132(+) A-I      intronic chr1:11804273(+) A-I      intronic chr1:11805121(+) A-I      intronic chr1:11804257(+) A-I      intronic chr1:11803724(+) A-I      intronic chr1:11802735(+) A-I      intronic chr1:11804238(+) A-I      intronic chr1:11805061(+) A-I      intronic chr1:11803884(+) A-I      intronic chr1:11802688(+) A-I      intronic chr1:11802797(+) A-I      intronic chr1:11802771(+) A-I      intronic chr1:11804061(+) A-I      intronic chr1:11802614(+) A-I      intronic chr1:11803383(+) A-I      intronic chr1:11803885(+) A-I      intronic chr1:11803803(+) A-I      intronic chr1:11802849(+) A-I      intronic chr1:11802754(+) A-I      intronic chr1:11802700(+) A-I      intronic chr1:11802638(+) A-I      intronic chr1:11803483(+) A-I      intronic chr1:11804147(+) A-I      intronic chr1:11802687(+) A-I      intronic chr1:11799379(+) A-I      intronic chr1:11802877(+) A-I      intronic chr1:11803420(+) A-I      intronic chr1:11804247(+) A-I      intronic chr1:11804173(+) A-I      intronic chr1:11804235(+) A-I      intronic chr1:11803765(+) A-I      intronic chr1:11804938(+) A-I      intronic chr1:11804251(+) A-I      intronic chr1:11799501(+) A-I      intronic chr1:11804252(+) A-I      intronic chr1:11804108(+) A-I      intronic chr1:11810410(+) A-I      3'UTR chr1:11803677(+) A-I      intronic chr1:11802793(+) A-I      intronic chr1:11799487(+) A-I      intronic chr1:11804168(+) A-I      intronic chr1:11804151(+) A-I      intronic chr1:11804171(+) A-I      intronic chr1:11803897(+) A-I      intronic chr1:11804078(+) A-I      intronic chr1:11804077(+) A-I      intronic chr1:11804185(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AGTRAP	chr1:11810410(+) A-I exon 3'UTR    19478186 chr1:11799507(+) T-C intron -    22484847 chr1:11802688(+) A-G intron -    22484847 chr1:11803483(+) A-G intron -    22484847 chr1:11803765(+) A-G intron -    22484847 chr1:11803803(+) A-G intron -    22484847 chr1:11804061(+) A-G intron -    22484847 chr1:11804077(+) A-G intron -    22484847 chr1:11804078(+) A-G intron -    22484847 chr1:11804147(+) A-G intron -    22484847 chr1:11804151(+) A-G intron -    22484847 chr1:11804168(+) A-G intron -    22484847 chr1:11804251(+) A-G intron -    22484847 chr1:11804252(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AGTRAP	chr1:11796284-11796285(+) m6A CDS//exon       24981863 chr1:11810154-11810155(+) m6A 3'UTR//CDS//exon       - chr1:11810337-11810338(+) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//22575960//22608085 chr1:11810377-11810378(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085 chr1:11810434-11810435(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085 chr1:11810486-11810487(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960 chr1:11814552-11814553(+) m6A exon       25456834 chr1:11814557-11814558(+) m6A exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AGTRAP	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B26-5p
Interactor2: AGTRAP

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg