Basic Information:

  VIRBase ID:  

VHID00570243

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B26-5p:  MIMAT0031771          WDR55:  NM_017706     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B26-5p	WDR55
miRBase Accession/Entrez ID	MIMAT0031771	54853
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WDR55	chr5:140045433(+) A-I      intronic chr5:140045475(+) A-I      intronic chr5:140045551(+) A-I      intronic chr5:140045390(+) A-I      intronic chr5:140045427(+) A-I      intronic chr5:140045408(+) A-I      intronic chr5:140045410(+) A-I      intronic chr5:140045424(+) A-I      intronic chr5:140045187(+) A-I      intronic chr5:140045126(+) A-I      intronic chr5:140045084(+) A-I      intronic chr5:140045079(+) A-I      intronic chr5:140045072(+) A-I      intronic chr5:140045060(+) A-I      intronic chr5:140045024(+) A-I      intronic chr5:140045372(+) A-I      intronic chr5:140045425(+) A-I      intronic chr5:140045426(+) A-I      intronic chr5:140045439(+) A-I      intronic chr5:140045471(+) A-I      intronic chr5:140045771(+) A-I      intronic chr5:140045854(+) A-I      intronic chr5:140045069(+) A-I      intronic chr5:140045428(+) A-I      intronic chr5:140044999(+) A-I      intronic chr5:140045043(+) A-I      intronic chr5:140045536(+) A-I      intronic chr5:140045085(+) A-I      intronic chr5:140045082(+) A-I      intronic chr5:140045465(+) A-I      intronic chr5:140045466(+) A-I      intronic chr5:140045430(+) A-I      intronic chr5:140045018(+) A-I      intronic chr5:140045143(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	WDR55	chr5:140045501(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WDR55	chr5:140044501-140044502(+) m6A CDS       - chr5:140044549-140044550(+) m6A CDS       24284625 chr5:140044555-140044556(+) m6A CDS       24284625 chr5:140044585-140044586(+) m6A CDS       24284625 chr5:140048925-140048926(+) m6A 3'UTR//CDS//exon       24284625//22575960 chr5:140048937-140048938(+) m6A 3'UTR//CDS//exon       24284625//24209618//22575960//22608085 chr5:140049054-140049055(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr5:140049115-140049116(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:140049140-140049141(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:140049169-140049170(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:140049189-140049190(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:140049218-140049219(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr5:140049335-140049336(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr5:140049449-140049450(+) m6A 3'UTR//intron       24284625//24209618 chr5:140049953-140049954(+) m6A 3'UTR//intron       24209618 chr5:140050340-140050341(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr5:140050344-140050345(+) m6A 3'UTR//intron       27773535 chr5:140050362-140050363(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr5:140050371-140050372(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr5:140050424-140050425(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr5:140050431-140050432(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr5:140050442-140050443(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr5:140050448-140050449(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr5:140050526-140050527(+) m6A 3'UTR//intron       24284625//24981863 chr5:140050539-140050540(+) m6A 3'UTR//intron       24284625//24981863 chr5:140050549-140050550(+) m6A 3'UTR//intron       24284625//24981863 chr5:140050613-140050614(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr5:140050651-140050652(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr5:140050702-140050703(+) m6A 3'UTR//intron       24284625//24209618//24981863 chr5:140050915-140050916(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:140050936-140050937(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:140050966-140050967(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr5:140051108-140051109(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr5:140051122-140051123(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr5:140051185-140051186(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr5:140051236-140051237(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr5:140051249-140051250(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr5:140051354-140051355(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085 chr5:140051370-140051371(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085 chr5:140051472-140051473(+) m6A 3'UTR//exon//intron       24284625//24981863//22608085 chr5:140052374-140052375(+) m6A 3'UTR       24284625//24981863//22608085 chr5:140052401-140052402(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr5:140052452-140052453(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr5:140052552-140052553(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr5:140052583-140052584(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr5:140052827-140052828(+) m6A 3'UTR       24284625//25456834//24981863 chr5:140052845-140052846(+) m6A 3'UTR       24284625//25456834//24981863 chr5:140053120-140053121(+) m6A 3'UTR       24284625//24981863 chr5:140053295-140053296(+) m6A 3'UTR       24284625//24981863 chr5:140053387-140053388(+) m6A 3'UTR       24284625//24981863//22608085 chr5:140053393-140053394(+) m6A 3'UTR       24284625//24981863//22608085 chr5:140053487-140053488(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr5:140053513-140053514(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:140053575-140053576(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr5:140053613-140053614(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr5:140053618-140053619(+) m6A 3'UTR       24284625//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WDR55	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B26-5p
Interactor2: WDR55

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg