Basic Information:

  VIRBase ID:  

VHID00570215

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B26-5p:  MIMAT0031771          CHRAC1:  NR_023360     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B26-5p	CHRAC1
miRBase Accession/Entrez ID	MIMAT0031771	54108
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CHARC1//CHARC15//CHRAC-1//CHRAC-15//CHRAC15//YCL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CHRAC1	chr8:141526376(+) A-I      3'UTR chr8:141526278(+) A-I      3'UTR chr8:141526321(+) A-I      3'UTR chr8:141526327(+) A-I      3'UTR chr8:141526340(+) A-I      3'UTR chr8:141526526(+) A-I      3'UTR chr8:141526386(+) A-I      3'UTR chr8:141526482(+) A-I      3'UTR chr8:141526476(+) A-I      3'UTR chr8:141526481(+) A-I      3'UTR chr8:141526467(+) A-I      3'UTR chr8:141526508(+) A-I      3'UTR chr8:141526507(+) A-I      3'UTR chr8:141526408(+) A-I      3'UTR chr8:141526456(+) A-I      3'UTR chr8:141526444(+) A-I      3'UTR chr8:141526270(+) A-I      3'UTR chr8:141526524(+) A-I      3'UTR chr8:141526509(+) A-I      3'UTR chr8:141526266(+) A-I      3'UTR chr8:141526468(+) A-I      3'UTR chr8:141526499(+) A-I      3'UTR chr8:141526490(+) A-I      3'UTR chr8:141526316(+) A-I      3'UTR chr8:141526428(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CHRAC1	chr8:141524012(+) C-T intron -    22484847 chr8:141526428(+) A-G intron -    22484847 chr8:141526431(+) A-G intron -    22484847 chr8:141526475(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CHRAC1	chr8:141521623-141521624(+) m6A CDS       27773536//22575960 chr8:141525346-141525347(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr8:141525364-141525365(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr8:141525379-141525380(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr8:141525389-141525390(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr8:141525413-141525414(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr8:141525529-141525530(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr8:141525553-141525554(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr8:141525603-141525604(+) m6A 3'UTR//exon       24209618//25456834//24981863 chr8:141525635-141525636(+) m6A 3'UTR//exon       24209618//25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CHRAC1	Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B26-5p
Interactor2: CHRAC1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg