Detail Information

Basic Information:


  VIRBase ID:  

VHID00569618

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B26-5p:           VGF:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B26-5p VGF
miRBase
Accession/Entrez ID
MIMAT0031771 7425
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - SCG7//SgVII

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase VGF
chr7:100806123-100806124(-) m6A 3'UTR//CDS       24209618
chr7:100806132-100806133(-) m6A 3'UTR//CDS       24209618
chr7:100806464-100806465(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828
chr7:100806559-100806560(-) m6A CDS//intron       24284625//24209618//25456834//24981863
chr7:100806674-100806675(-) m1A CDS//intron       26863196
chr7:100806741-100806742(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828
chr7:100806821-100806822(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828
chr7:100806874-100806875(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828
chr7:100807135-100807136(-) m6A CDS       24209618//24981863
chr7:100807358-100807359(-) m6A CDS       24209618
chr7:100807394-100807395(-) m6A CDS       24209618
chr7:100807565-100807566(-) m6A CDS       24284625//24209618//25456834//24981863
chr7:100807629-100807630(-) m6A CDS       24284625//24209618//25456834//24981863
chr7:100807700-100807701(-) m6A CDS       24284625//24209618//25456834//24981863
chr7:100807757-100807758(-) m6A CDS       24209618//24981863
chr7:100807772-100807773(-) m6A CDS       24209618//24981863
chr7:100808774-100808775(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate VGF
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B26-5p
Interactor2: VGF

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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