Detail Information

Basic Information:


  VIRBase ID:  

VHID00568752

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:           ADAMTS16:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B21RC-5p ADAMTS16
miRBase
Accession/Entrez ID
MIMAT0031770 170690
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ADAMTS16s

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADAMTS16
chr5:5225539(+) A-I      intronic
chr5:5225540(+) A-I      intronic
chr5:5225560(+) A-I      intronic
chr5:5225563(+) A-I      intronic
chr5:5225555(+) A-I      intronic
chr5:5225726(+) A-I      intronic
chr5:5308988(+) A-I      intronic
chr5:5206284(+) A-I      intronic
chr5:5225665(+) A-I      intronic
chr5:5225595(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADAMTS16
chr5:5223488-5223489(+) m6A 3'UTR//intron       24209618//24981863
chr5:5223500-5223501(+) m6A 3'UTR//intron       24209618//25456834//24981863
chr5:5223507-5223508(+) m6A 3'UTR//intron       24209618//25456834//24981863
chr5:5223546-5223547(+) m6A 3'UTR//intron       24209618//25456834//24981863
chr5:5223563-5223564(+) m6A 3'UTR//intron       24209618//25456834//24981863
chr5:5223577-5223578(+) m6A 3'UTR//intron       24209618//25456834//24981863
chr5:5223584-5223585(+) m6A 3'UTR//intron       25456834//24981863
chr5:5223593-5223594(+) m6A 3'UTR//intron       25456834//24981863
chr5:5223633-5223634(+) m6A 3'UTR//intron       25456834//24981863
chr5:5319429-5319430(+) m6A 3'UTR       -
chr5:5319487-5319488(+) m6A 3'UTR       25456834
chr5:5319579-5319580(+) m6A 3'UTR       25456834//24981863
chr5:5319593-5319594(+) m6A 3'UTR       25456834//24981863
chr5:5319649-5319650(+) m6A 3'UTR       25456834//24981863
chr5:5319814-5319815(+) m6A 3'UTR       25456834//24981863
chr5:5319866-5319867(+) m6A 3'UTR       25456834//24981863
chr5:5319884-5319885(+) m6A 3'UTR       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ADAMTS16
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B21RC-5p
Interactor2: ADAMTS16

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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