Basic Information:

  VIRBase ID:  

VHID00568654

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:  MIMAT0031770          TRIM50:  NM_001281451     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B21RC-5p	TRIM50
miRBase Accession/Entrez ID	MIMAT0031770	135892
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	TRIM50A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TRIM50	chr7:72737871(-) A-I      intronic chr7:72733376(-) A-I      intronic chr7:72734961(-) A-I      intronic chr7:72734963(-) A-I      intronic chr7:72737821(-) A-I      intronic chr7:72733371(-) A-I      intronic chr7:72733369(-) A-I      intronic chr7:72737794(-) A-I      intronic chr7:72734960(-) A-I      intronic chr7:72737895(-) A-I      intronic chr7:72737963(-) A-I      intronic chr7:72737366(-) A-I      intronic chr7:72737874(-) A-I      intronic chr7:72737870(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TRIM50	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B21RC-5p
Interactor2: TRIM50

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg