Detail Information

Basic Information:


  VIRBase ID:  

VHID00568108

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:           NMRK1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B21RC-5p NMRK1
miRBase
Accession/Entrez ID		 MIMAT0031770 54981
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - bA235O14.2//C9orf95//NRK1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NMRK1
chr9:77692654(-) A-I      intronic
chr9:77692620(-) A-I      intronic
chr9:77692612(-) A-I      intronic
chr9:77701993(-) A-I      intronic
chr9:77691777(-) A-I      intronic
chr9:77688543(-) A-I      intronic
chr9:77688527(-) A-I      intronic
chr9:77688525(-) A-I      intronic
chr9:77688420(-) A-I      intronic
chr9:77688411(-) A-I      intronic
chr9:77701990(-) A-I      intronic
chr9:77678175(-) A-I      intronic
chr9:77678159(-) A-I      intronic
chr9:77678100(-) A-I      intronic
chr9:77692648(-) A-I      intronic
chr9:77692684(-) A-I      intronic
chr9:77692690(-) A-I      intronic
chr9:77692716(-) A-I      intronic
chr9:77692755(-) A-I      intronic
chr9:77692779(-) A-I      intronic
chr9:77692840(-) A-I      intronic
chr9:77695506(-) A-I      intronic
chr9:77699522(-) A-I      intronic
chr9:77701933(-) A-I      intronic
chr9:77699624(-) A-I      intronic
chr9:77699649(-) A-I      intronic
chr9:77699659(-) A-I      intronic
chr9:77692731(-) A-I      intronic
chr9:77678098(-) A-I      intronic
chr9:77678027(-) A-I      intronic
chr9:77677895(-) A-I      intronic
chr9:77677865(-) A-I      intronic
chr9:77701895(-) A-I      intronic
chr9:77699704(-) A-I      intronic
chr9:77699620(-) A-I      intronic
chr9:77699598(-) A-I      intronic
chr9:77695486(-) A-I      intronic
chr9:77702005(-) A-I      intronic
chr9:77692725(-) A-I      intronic
chr9:77702026(-) A-I      intronic
chr9:77695460(-) A-I      intronic
chr9:77695404(-) A-I      intronic
chr9:77695402(-) A-I      intronic
chr9:77695400(-) A-I      intronic
chr9:77695388(-) A-I      intronic
chr9:77695351(-) A-I      intronic
chr9:77692729(-) A-I      intronic
chr9:77692728(-) A-I      intronic
chr9:77692727(-) A-I      intronic
chr9:77680290(-) A-I      intronic
chr9:77702042(-) A-I      intronic
chr9:77699539(-) A-I      intronic
chr9:77695338(-) A-I      intronic
chr9:77701986(-) A-I      intronic
chr9:77680224(-) A-I      intronic
chr9:77689519(-) A-I      intronic
chr9:77689375(-) A-I      intronic
chr9:77689114(-) A-I      intronic
chr9:77689467(-) A-I      intronic
chr9:77695446(-) A-I      intronic
chr9:77689346(-) A-I      intronic
chr9:77680358(-) A-I      intronic
chr9:77677780(-) A-I      intronic
chr9:77677970(-) A-I      intronic
chr9:77688555(-) A-I      intronic
chr9:77695485(-) A-I      intronic
chr9:77677799(-) A-I      intronic
chr9:77689356(-) A-I      intronic
chr9:77692765(-) A-I      intronic
chr9:77702001(-) A-I      intronic
chr9:77688617(-) A-I      intronic
chr9:77689400(-) A-I      intronic
chr9:77699630(-) A-I      intronic
chr9:77699692(-) A-I      intronic
chr9:77677826(-) A-I      intronic
chr9:77678031(-) A-I      intronic
chr9:77699717(-) A-I      intronic
chr9:77699584(-) A-I      intronic
chr9:77689555(-) A-I      intronic
chr9:77699643(-) A-I      intronic
chr9:77702016(-) A-I      intronic
chr9:77695411(-) A-I      intronic
chr9:77677785(-) A-I      intronic
chr9:77680289(-) A-I      intronic
chr9:77696291(-) A-I      intronic
chr9:77689427(-) A-I      intronic
chr9:77692798(-) A-I      intronic
chr9:77688546(-) A-I      intronic
chr9:77680357(-) A-I      intronic
chr9:77699611(-) A-I      intronic
chr9:77680258(-) A-I      intronic
chr9:77702049(-) A-I      intronic
chr9:77701991(-) A-I      intronic
chr9:77702094(-) A-I      intronic
chr9:77695558(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NMRK1
chr9:77689346(-) A-I intron -    22327324
chr9:77702093(-) A-I intron -    22327324
chr9:77689346(-) A-G intron -    22484847
chr9:77689381(-) A-G intron -    22484847
chr9:77692730(-) A-G intron -    22484847
chr9:77695446(-) A-G intron -    22484847
chr9:77695468(-) A-G intron -    22484847
chr9:77699643(-) A-G intron -    22484847
chr9:77702093(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NMRK1
chr9:77676166-77676167(-) m6A 3'UTR//exon       27773535//22608085
chr9:77676193-77676194(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr9:77676279-77676280(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr9:77676284-77676285(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr9:77676307-77676308(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr9:77676401-77676402(-) m6A 3'UTR//exon       22608085
chr9:77702645-77702646(-) m6A exon//intron       24284625//25456834//24981863//27371828//22608085
chr9:77702656-77702657(-) m6A exon//intron       24284625//25456834//24981863//27371828//22608085
chr9:77702684-77702685(-) m6A exon//intron       24284625//25456834//24981863//27371828//22608085
chr9:77702933-77702934(-) m6A 5'UTR//exon       24284625//25456834//24981863//27371828//27773536//22608085
chr9:77702939-77702940(-) m6A 5'UTR//exon       24284625//25456834//24981863//27371828//27773536//22608085
chr9:77703118-77703119(-) m6A 5'UTR       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NMRK1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B21RC-5p
Interactor2: NMRK1

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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