Detail Information

Basic Information:


  VIRBase ID:  

VHID00568033

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:           SHISA5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B21RC-5p SHISA5
miRBase
Accession/Entrez ID		 MIMAT0031770 51246
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - SCOTIN

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SHISA5
chr3:48534085(-) A-I      intronic
chr3:48534084(-) A-I      intronic
chr3:48512456(-) A-I      intronic
chr3:48512244(-) A-I      intronic
chr3:48512239(-) A-I      intronic
chr3:48512121(-) A-I      intronic
chr3:48534080(-) A-I      intronic
chr3:48533031(-) A-I      intronic
chr3:48532499(-) A-I      intronic
chr3:48528976(-) A-I      intronic
chr3:48528903(-) A-I      intronic
chr3:48528891(-) A-I      intronic
chr3:48527974(-) A-I      intronic
chr3:48525377(-) A-I      intronic
chr3:48525287(-) A-I      intronic
chr3:48524170(-) A-I      intronic
chr3:48524122(-) A-I      intronic
chr3:48524115(-) A-I      intronic
chr3:48531524(-) A-I      intronic
chr3:48524107(-) A-I      intronic
chr3:48523724(-) A-I      intronic
chr3:48523137(-) A-I      intronic
chr3:48523123(-) A-I      intronic
chr3:48523068(-) A-I      intronic
chr3:48533102(-) A-I      intronic
chr3:48522068(-) A-I      intronic
chr3:48522056(-) A-I      intronic
chr3:48522005(-) A-I      intronic
chr3:48521985(-) A-I      intronic
chr3:48521971(-) A-I      intronic
chr3:48517667(-) A-I      intronic
chr3:48517601(-) A-I      intronic
chr3:48517570(-) A-I      intronic
chr3:48515363(-) A-I      intronic
chr3:48513492(-) A-I      intronic
chr3:48513249(-) A-I      intronic
chr3:48512902(-) A-I      intronic
chr3:48512671(-) A-I      intronic
chr3:48512630(-) A-I      intronic
chr3:48512615(-) A-I      intronic
chr3:48512555(-) A-I      intronic
chr3:48512532(-) A-I      intronic
chr3:48512465(-) A-I      intronic
chr3:48517587(-) A-I      intronic
chr3:48531519(-) A-I      intronic
chr3:48531492(-) A-I      intronic
chr3:48531464(-) A-I      intronic
chr3:48531463(-) A-I      intronic
chr3:48527953(-) A-I      intronic
chr3:48537887(-) A-I      intronic
chr3:48536747(-) A-I      intronic
chr3:48536711(-) A-I      intronic
chr3:48536660(-) A-I      intronic
chr3:48536045(-) A-I      intronic
chr3:48535254(-) A-I      intronic
chr3:48535236(-) A-I      intronic
chr3:48535148(-) A-I      intronic
chr3:48535117(-) A-I      intronic
chr3:48534578(-) A-I      intronic
chr3:48512879(-) A-I      intronic
chr3:48529974(-) A-I      intronic
chr3:48530659(-) A-I      intronic
chr3:48512578(-) A-I      intronic
chr3:48529986(-) A-I      intronic
chr3:48534602(-) A-I      intronic
chr3:48512487(-) A-I      intronic
chr3:48522965(-) A-I      intronic
chr3:48518780(-) A-I      intronic
chr3:48535226(-) A-I      intronic
chr3:48533053(-) A-I      intronic
chr3:48515919(-) A-I      intronic
chr3:48518606(-) A-I      intronic
chr3:48528248(-) A-I      intronic
chr3:48536682(-) A-I      intronic
chr3:48536868(-) A-I      intronic
chr3:48535876(-) A-I      intronic
chr3:48513480(-) A-I      intronic
chr3:48512217(-) A-I      intronic
chr3:48517584(-) A-I      intronic
chr3:48529086(-) A-I      intronic
chr3:48515225(-) A-I      intronic
chr3:48512529(-) A-I      intronic
chr3:48525367(-) A-I      intronic
chr3:48535209(-) A-I      intronic
chr3:48530003(-) A-I      intronic
chr3:48535090(-) A-I      intronic
chr3:48534967(-) A-I      intronic
chr3:48512629(-) A-I      intronic
chr3:48535877(-) A-I      intronic
chr3:48513527(-) A-I      intronic
chr3:48529596(-) A-I      intronic
chr3:48518641(-) A-I      intronic
chr3:48515299(-) A-I      intronic
chr3:48528151(-) A-I      intronic
chr3:48512524(-) A-I      intronic
chr3:48537080(-) A-I      intronic
chr3:48512243(-) A-I      intronic
chr3:48515894(-) A-I      intronic
chr3:48515278(-) A-I      intronic
chr3:48532642(-) A-I      intronic
chr3:48518708(-) A-I      intronic
chr3:48529597(-) A-I      intronic
chr3:48523715(-) A-I      intronic
chr3:48512613(-) A-I      intronic
chr3:48525276(-) A-I      intronic
chr3:48518951(-) A-I      intronic
chr3:48524482(-) A-I      intronic
chr3:48533981(-) A-I      intronic
chr3:48512573(-) A-I      intronic
chr3:48534110(-) A-I      intronic
chr3:48515204(-) A-I      intronic
chr3:48531176(-) A-I      intronic
chr3:48512798(-) A-I      intronic
chr3:48518891(-) A-I      intronic
chr3:48534807(-) A-I      intronic
chr3:48512770(-) A-I      intronic
chr3:48513714(-) A-I      intronic
chr3:48534104(-) A-I      intronic
chr3:48534950(-) A-I      intronic
chr3:48513805(-) A-I      intronic
chr3:48517664(-) A-I      intronic
chr3:48513429(-) A-I      intronic
chr3:48533025(-) A-I      intronic
chr3:48513509(-) A-I      intronic
chr3:48513175(-) A-I      intronic
chr3:48536701(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SHISA5
chr3:48512217(-) A-G intron -    22484847
chr3:48512243(-) A-G intron -    22484847
chr3:48512613(-) A-G intron -    22484847
chr3:48512879(-) A-G intron -    22484847
chr3:48513509(-) A-G intron -    22484847
chr3:48515278(-) A-G intron -    22484847
chr3:48515299(-) A-G intron -    22484847
chr3:48515410(-) A-G intron -    22484847
chr3:48516027(-) A-G intron -    22484847
chr3:48517584(-) A-G intron -    22484847
chr3:48517664(-) A-G intron -    22484847
chr3:48518708(-) A-G intron -    22484847
chr3:48530003(-) A-G intron -    22484847
chr3:48533981(-) A-G intron -    22484847
chr3:48534807(-) A-G intron -    22484847
chr3:48534811(-) A-G intron -    22484847
chr3:48536920(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SHISA5
chr3:48509397-48509398(-) m6A 3'UTR//exon       24284625//27773535
chr3:48509441-48509442(-) m6A 3'UTR//exon       24284625//24981863//27773535
chr3:48509466-48509467(-) m6A 3'UTR//exon       24284625//24981863//27773535
chr3:48509562-48509563(-) m6A 3'UTR//exon       24284625//24981863//27773535
chr3:48509599-48509600(-) m6A 3'UTR//exon       24284625//24981863//27773535
chr3:48509605-48509606(-) m6A 3'UTR//exon       24284625//24981863//27773535
chr3:48509624-48509625(-) m6A 3'UTR//exon//intron       24284625//27773535
chr3:48509649-48509650(-) m6A 3'UTR//exon//intron       24284625
chr3:48509803-48509804(-) m6A 3'UTR//exon//intron       24284625//27773535//27773536
chr3:48509833-48509834(-) m6A 3'UTR//exon//intron       24284625//27773535//27773536
chr3:48509876-48509877(-) m6A 3'UTR//exon//intron       24284625//27773535//27773536
chr3:48509959-48509960(-) m6A 3'UTR//exon//intron       24284625
chr3:48509997-48509998(-) m6A 3'UTR//exon//intron       24284625
chr3:48510291-48510292(-) m6A 3'UTR//CDS//exon//intron       27773535
chr3:48510296-48510297(-) m6A 3'UTR//CDS//exon//intron       27773535
chr3:48510321-48510322(-) m6A 3'UTR//CDS//exon//intron       27773535
chr3:48510368-48510369(-) Y 3'UTR//exon//intron       26075521
chr3:48510683-48510684(-) m6A exon//intron       24284625
chr3:48510768-48510769(-) m6A 3'UTR//CDS//exon       24284625//24981863//28052920//27773535
chr3:48510889-48510890(-) m6A 3'UTR//5'UTR//CDS//exon       24284625//24981863//28052920//27773535
chr3:48511016-48511017(-) m6A exon//intron       24284625//27773535
chr3:48514496-48514497(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SHISA5
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B21RC-5p
Interactor2: SHISA5

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

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