Detail Information

Basic Information:


  VIRBase ID:  

VHID00567900

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:           OTP:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B21RC-5p OTP
miRBase
Accession/Entrez ID
MIMAT0031770 23440
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OTP
chr5:76927467(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OTP
chr5:76925398-76925399(-) m6A 3'UTR       -
chr5:76925434-76925435(-) m6A 3'UTR       -
chr5:76925473-76925474(-) m6A 3'UTR       -
chr5:76925528-76925529(-) m6A 3'UTR       -
chr5:76925546-76925547(-) m6A 3'UTR       -
chr5:76925556-76925557(-) m6A 3'UTR       -
chr5:76926010-76926011(-) m6A 3'UTR       -
chr5:76926173-76926174(-) m6A CDS       -
chr5:76926605-76926606(-) m6A CDS       -
chr5:76932461-76932462(-) m6A exon//intron       -
chr5:76932489-76932490(-) m6A exon//intron       -
chr5:76932716-76932717(-) m6A CDS//exon       -
chr5:76932820-76932821(-) m6A CDS       -
chr5:76932850-76932851(-) m6A CDS       -
chr5:76932856-76932857(-) m6A CDS       -
chr5:76932907-76932908(-) m6A CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OTP
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B21RC-5p
Interactor2: OTP

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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