Detail Information

Basic Information:


  VIRBase ID:  

VHID00567808

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:           GADD45G:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B21RC-5p GADD45G
miRBase
Accession/Entrez ID
MIMAT0031770 10912
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - CR6//DDIT2//GADD45gamma//GRP17

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GADD45G
chr9:92221007-92221008(+) m6A 3'UTR//exon       25456834
chr9:92221103-92221104(+) m6A 3'UTR       25456834//24981863
chr9:92221197-92221198(+) m6A 3'UTR       25456834//24981863//22608085
chr9:92221271-92221272(+) m6A 3'UTR       25456834//24981863//22608085
chr9:92221334-92221335(+) m6A 3'UTR       25456834//24981863
chr9:92221362-92221363(+) m6A 3'UTR       25456834//24981863
chr9:92221455-92221456(+) m6A 3'UTR       25456834
chr9:92221465-92221466(+) m6A 3'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GADD45G
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B21RC-5p
Interactor2: GADD45G

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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