Basic Information:

  VIRBase ID:  

VHID00567673

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:  MIMAT0031770          CHST10:  NM_004854     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B21RC-5p	CHST10
miRBase Accession/Entrez ID	MIMAT0031770	9486
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HNK-1ST//HNK1ST

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CHST10	chr2:101016953(-) A-I      intronic chr2:101016974(-) A-I      intronic chr2:101016977(-) A-I      intronic chr2:101016983(-) A-I      intronic chr2:101016975(-) A-I      intronic chr2:101015103(-) A-I      intronic chr2:101015018(-) A-I      intronic chr2:101016870(-) A-I      intronic chr2:101015054(-) A-I      intronic chr2:101016869(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CHST10	chr2:101015018(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CHST10	chr2:101008326-101008327(-) m6A 3'UTR       - chr2:101008484-101008485(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr2:101008490-101008491(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr2:101008500-101008501(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr2:101008605-101008606(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:101008649-101008650(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:101008822-101008823(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101008915-101008916(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:101008993-101008994(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101009031-101009032(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:101009120-101009121(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:101009231-101009232(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:101009265-101009266(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:101009278-101009279(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:101009290-101009291(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr2:101009505-101009506(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr2:101009549-101009550(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr2:101009670-101009671(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr2:101009697-101009698(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr2:101009710-101009711(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr2:101009722-101009723(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr2:101009727-101009728(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr2:101009752-101009753(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr2:101009785-101009786(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr2:101009825-101009826(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr2:101009924-101009925(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr2:101009934-101009935(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr2:101010004-101010005(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101010019-101010020(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101010034-101010035(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101010083-101010084(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101010089-101010090(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101010094-101010095(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr2:101010195-101010196(-) m6A CDS       24284625//24981863//27773535//22608085 chr2:101010236-101010237(-) m6A CDS       24284625//24981863//22608085 chr2:101031537-101031538(-) m6A 5'UTR//CDS//exon       24209618 chr2:101031554-101031555(-) m6A 5'UTR//CDS//exon       24209618 chr2:101031561-101031562(-) m6A 5'UTR//CDS//exon       24209618 chr2:101032263-101032264(-) m6A 5'UTR//intron       24209618 chr2:101033860-101033861(-) m6A 5'UTR//exon       24209618//27371828//27773536 chr2:101033937-101033938(-) m6A 5'UTR//exon       24209618//27371828//27773536 chr2:101034000-101034001(-) m6A 5'UTR//exon       24209618//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CHST10	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B21RC-5p
Interactor2: CHST10

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg